FFCP PHASE1:Hg19::chr10:5446786..5446795,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79861 | |EntrezGene=79861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23534 | |HGNC=23534 | ||
|TSSclassifier=strong | |||
|UniProt=A6NHL2 | |UniProt=A6NHL2 | ||
|association_with_transcript=0bp_to_ENST00000380419,ENST00000479328,NM_001171864,NM_024803,uc001ihy.2,uc001ihz.2_5end | |||
|cluster_id=chr10:5446786..5446795,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_TUBAL3_5end | |||
|id=chr10:5446786..5446795,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000307;1.90e-09;3!CL:0002202;7.26e-07;9!CL:0002632;7.26e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.03e-09,3;CL:0000069,2.03e-09,3;CL:0000307,2.03e-09,3;CL:0000377,2.03e-09,3;CL:0002202,6.69e-07,9;CL:0002632,6.69e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;1.90e-09;3 | |||
|ontology_enrichment_disease=DOID:1036!1.58e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.67e-20;8!DOID:8692;2.83e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.02e-20,8;DOID:1240,2.84e-07,39;DOID:8692,5.20e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.24e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.10e-17;17!UBERON:0005409;1.19e-13;22!UBERON:0002108;5.75e-13;4!UBERON:0004921;3.36e-08;33!UBERON:0002135;1.39e-07;1!UBERON:0001155;2.44e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.08e-17,17;UBERON:0002108,5.87e-13,4;UBERON:0005409,5.59e-12,25;UBERON:0002135,1.44e-07,1;UBERON:0001155,2.44e-07,9 | |||
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| ||
|short_description=p1@TUBAL3 | |||
}} | }} |
Latest revision as of 12:40, 18 September 2015
Short description: | p1@TUBAL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TUBAL3_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000380419, ENST00000479328, NM_001171864, NM_024803, uc001ihy.2, uc001ihz.2_5end |
EntrezGene: | TUBAL3 |
HGNC: | 23534 |
UniProt: | A6NHL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.03e-09 | 3 |
branched duct epithelial cell | 2.03e-09 | 3 |
tracheal epithelial cell | 2.03e-09 | 3 |
tracheoblast | 2.03e-09 | 3 |
epithelial cell of tracheobronchial tree | 6.69e-07 | 9 |
epithelial cell of lower respiratory tract | 6.69e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.08e-17 | 17 |
small intestine | 5.87e-13 | 4 |
gastrointestinal system | 5.59e-12 | 25 |
mitral valve | 1.44e-07 | 1 |
colon | 2.44e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.02e-20 | 8 |
leukemia | 2.84e-07 | 39 |
myeloid leukemia | 5.20e-07 | 31 |