FFCP PHASE1:Hg19::chr4:74275062..74275067,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=213 | |EntrezGene=213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=399 | |HGNC=399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_uc003hgx.3_5end | |association_with_transcript=7bp_to_uc003hgx.3_5end | ||
|cluster_id=chr4:74275062..74275067,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_46_at_ALB_5end | |description=CAGE_peak_46_at_ALB_5end | ||
|id=chr4:74275062..74275067,+ | |id=chr4:74275062..74275067,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.54e-34!12;CL:0000417!1.54e-34!12;CL:0000668!1.54e-34!12;CL:0000414!1.54e-34!12;CL:0000412!1.54e-34!12;CL:0000182!1.54e-34!12;CL:0000223!6.47e-10!59;CL:0002195!1.86e-09!2;CL:0002571!1.86e-09!2 | |ontology_enrichment_celltype=CL:0000181!1.54e-34!12;CL:0000417!1.54e-34!12;CL:0000668!1.54e-34!12;CL:0000414!1.54e-34!12;CL:0000412!1.54e-34!12;CL:0000182!1.54e-34!12;CL:0000223!6.47e-10!59;CL:0002195!1.86e-09!2;CL:0002571!1.86e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.67e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.30e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.95e-13;11!UBERON:0009497;3.47e-11;13 | |||
|ontology_enrichment_disease=DOID:178!1.22e-17!1;DOID:326!1.22e-17!1;DOID:3978!1.22e-17!1;DOID:3394!1.22e-17!1;DOID:5844!1.22e-17!1;DOID:114!1.71e-09!2;DOID:7!4.81e-07!39 | |ontology_enrichment_disease=DOID:178!1.22e-17!1;DOID:326!1.22e-17!1;DOID:3978!1.22e-17!1;DOID:3394!1.22e-17!1;DOID:5844!1.22e-17!1;DOID:114!1.71e-09!2;DOID:7!4.81e-07!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.17e-55!19;UBERON:0006925!5.17e-55!19;UBERON:0008836!5.17e-55!19;UBERON:0008835!1.78e-47!22;UBERON:0003894!1.78e-47!22;UBERON:0009854!2.12e-45!23;UBERON:0007499!9.58e-42!25;UBERON:0009497!9.58e-42!25;UBERON:0000015!9.58e-42!25;UBERON:0002423!9.58e-42!25;UBERON:0006235!9.58e-42!25;UBERON:0004161!9.58e-42!25;UBERON:0005057!3.97e-40!26;UBERON:0009856!3.97e-40!26;UBERON:0002365!1.33e-33!31;UBERON:0002330!1.33e-33!31;UBERON:0002368!1.01e-29!35;UBERON:0003929!4.22e-24!54;UBERON:0000949!5.01e-23!45;UBERON:0005172!9.30e-19!55;UBERON:0005173!9.30e-19!55;UBERON:0002530!1.88e-17!59;UBERON:0002417!7.27e-17!61;UBERON:0000916!7.27e-17!61;UBERON:0005911!1.16e-15!82;UBERON:0001041!2.75e-10!98;UBERON:0004921!1.29e-09!129;UBERON:0004185!1.29e-09!129;UBERON:0005177!2.27e-09!107;UBERON:0000490!5.17e-09!138;UBERON:0009569!7.70e-09!113;UBERON:0002405!1.35e-08!115;UBERON:0003914!1.94e-08!118;UBERON:0001007!7.02e-08!155;UBERON:0001555!7.02e-08!155;UBERON:0007026!7.02e-08!155;UBERON:0000466!7.34e-08!126;UBERON:0000077!1.34e-07!130;UBERON:0004119!3.66e-07!169;UBERON:0000925!3.66e-07!169;UBERON:0006595!3.66e-07!169;UBERON:0005256!7.60e-07!143 | |ontology_enrichment_uberon=UBERON:0002107!5.17e-55!19;UBERON:0006925!5.17e-55!19;UBERON:0008836!5.17e-55!19;UBERON:0008835!1.78e-47!22;UBERON:0003894!1.78e-47!22;UBERON:0009854!2.12e-45!23;UBERON:0007499!9.58e-42!25;UBERON:0009497!9.58e-42!25;UBERON:0000015!9.58e-42!25;UBERON:0002423!9.58e-42!25;UBERON:0006235!9.58e-42!25;UBERON:0004161!9.58e-42!25;UBERON:0005057!3.97e-40!26;UBERON:0009856!3.97e-40!26;UBERON:0002365!1.33e-33!31;UBERON:0002330!1.33e-33!31;UBERON:0002368!1.01e-29!35;UBERON:0003929!4.22e-24!54;UBERON:0000949!5.01e-23!45;UBERON:0005172!9.30e-19!55;UBERON:0005173!9.30e-19!55;UBERON:0002530!1.88e-17!59;UBERON:0002417!7.27e-17!61;UBERON:0000916!7.27e-17!61;UBERON:0005911!1.16e-15!82;UBERON:0001041!2.75e-10!98;UBERON:0004921!1.29e-09!129;UBERON:0004185!1.29e-09!129;UBERON:0005177!2.27e-09!107;UBERON:0000490!5.17e-09!138;UBERON:0009569!7.70e-09!113;UBERON:0002405!1.35e-08!115;UBERON:0003914!1.94e-08!118;UBERON:0001007!7.02e-08!155;UBERON:0001555!7.02e-08!155;UBERON:0007026!7.02e-08!155;UBERON:0000466!7.34e-08!126;UBERON:0000077!1.34e-07!130;UBERON:0004119!3.66e-07!169;UBERON:0000925!3.66e-07!169;UBERON:0006595!3.66e-07!169;UBERON:0005256!7.60e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.67e-28;19!UBERON:0006925;2.67e-28;19!UBERON:0002423;1.09e-21;25!UBERON:0002365;1.93e-17;31!UBERON:0002330;1.93e-17;31!UBERON:0002368;1.14e-14;33!UBERON:0000949;1.36e-10;43!UBERON:0005172;3.05e-08;52!UBERON:0005173;3.05e-08;52!UBERON:0002417;4.42e-07;58!UBERON:0000916;4.42e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.49e-28,19;UBERON:0006925,2.49e-28,19;UBERON:0008836,2.49e-28,19;UBERON:0008835,1.43e-24,22;UBERON:0003894,1.43e-24,22;UBERON:0009854,1.55e-23,23;UBERON:0007499,1.03e-21,25;UBERON:0009497,1.03e-21,25;UBERON:0000015,1.03e-21,25;UBERON:0002423,1.03e-21,25;UBERON:0006235,1.03e-21,25;UBERON:0004161,1.03e-21,25;UBERON:0009856,6.62e-21,26;UBERON:0002365,1.20e-17,31;UBERON:0002330,1.20e-17,31;UBERON:0002368,1.05e-15,35;UBERON:0000949,2.36e-12,45;UBERON:0003929,2.17e-10,54;UBERON:0005172,2.17e-10,54;UBERON:0005173,2.17e-10,54;UBERON:0002530,1.49e-09,59;UBERON:0002417,2.10e-09,60;UBERON:0000916,2.10e-09,60;UBERON:0005911,5.19e-07,82 | |||
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|short_description=p46@ALB | |short_description=p46@ALB | ||
}} | }} |
Latest revision as of 12:40, 18 September 2015
Short description: | p46@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_46_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 7bp_to_uc003hgx.3_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.30e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.49e-28 | 19 |
digestive gland | 2.49e-28 | 19 |
liver bud | 2.49e-28 | 19 |
hepatic diverticulum | 1.43e-24 | 22 |
liver primordium | 1.43e-24 | 22 |
digestive tract diverticulum | 1.55e-23 | 23 |
epithelial sac | 1.03e-21 | 25 |
epithelium of foregut-midgut junction | 1.03e-21 | 25 |
anatomical boundary | 1.03e-21 | 25 |
hepatobiliary system | 1.03e-21 | 25 |
foregut-midgut junction | 1.03e-21 | 25 |
septum transversum | 1.03e-21 | 25 |
sac | 6.62e-21 | 26 |
exocrine gland | 1.20e-17 | 31 |
exocrine system | 1.20e-17 | 31 |
endocrine gland | 1.05e-15 | 35 |
endocrine system | 2.36e-12 | 45 |
gut epithelium | 2.17e-10 | 54 |
abdomen element | 2.17e-10 | 54 |
abdominal segment element | 2.17e-10 | 54 |
gland | 1.49e-09 | 59 |
abdominal segment of trunk | 2.10e-09 | 60 |
abdomen | 2.10e-09 | 60 |
endo-epithelium | 5.19e-07 | 82 |