FFCP PHASE1:Hg19::chr1:52870104..52870134,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:52870104..52870134,-
|short_description=p2@ORC1
|description=CAGE_peak_2_at_ORC1_5end
|association_with_transcript=0bp_to_ENST00000371568,uc001ctt.2,uc001c...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4998 | |EntrezGene=4998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8487 | |HGNC=8487 | ||
|TSSclassifier=strong | |||
|UniProt=Q13415 | |UniProt=Q13415 | ||
|association_with_transcript=0bp_to_ENST00000371568,uc001ctt.2,uc001ctu.2,uc009vzd.2,uc010oni.1_5end | |||
|cluster_id=chr1:52870104..52870134,- | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_2_at_ORC1_5end | |||
|id=chr1:52870104..52870134,- | |||
|ontology_enrichment_celltype=CL:0000548!2.71e-12!679;CL:0000004!2.71e-12!679;CL:0000255!2.71e-12!679;CL:0000012!3.94e-12!682;CL:0000066!2.66e-11!254;CL:0000003!5.53e-08!722;CL:0002319!2.51e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.77e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.33e-09,253;CL:0002319,6.15e-08,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.47e-41!235;DOID:14566!3.89e-40!239;DOID:2531!2.09e-23!51;DOID:0060083!2.09e-23!51;DOID:0050686!6.03e-21!137;DOID:1240!1.36e-19!39;DOID:0050687!8.45e-19!143;DOID:305!4.76e-17!106;DOID:8692!1.36e-15!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.32e-19;39!DOID:8692;2.11e-18;31!DOID:2531;2.31e-17;51!DOID:0060083;2.31e-17;51!DOID:0060058;2.68e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.54e-36,235;DOID:14566,5.26e-35,239;DOID:2531,1.11e-27,51;DOID:0060083,1.11e-27,51;DOID:1240,8.39e-24,39;DOID:0050686,3.83e-20,137;DOID:8692,7.25e-19,31;DOID:0050687,3.22e-15,143;DOID:305,2.69e-14,106;DOID:0060058,3.66e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0,0,0.893922188854576,0,2.53299878168311,0,0,1.72013755551056,1.39560233594486,2.18441372130172,0.527533956456907,0.123766352960047,0,0,0,0.730310090387373,0,2.33930010345897,1.42800483870977,1.25381888591235,3.72106783270374,5.47497700291537,4.3939923858181,8.40547463227464,7.7174554082949,10.8620878212877,0.786728553697808,0,0.154816123316076,1.83884244895785,2.71085326900425,0,6.11990884584383,4.40724620711007,3.22960483268332,0,0,0,0.223915474239924,0,0.515151135268373,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0.628975936525128,0.112328631146495,0.300353785683013,0,0.285012743741249,0,0.365328307529268,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,3.68737718685108,0,0,0.205601498999509,1.17030546773475,0,0,0,1.44833593950726,0.294605907474837,0.221533894583621,0,2.17755243533648,3.64166173167659,3.28875809207352,2.21080014228679,1.44901542867526,0,0,0,2.15287751125376,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0,0,0.127986611154418,2.49861453104692,0.710331756132051,0.821127996921047,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0.383587685530591,1.0843174571537,0,0.144846518960824,0.795285947051099,0,1.89069634328136,0.665188192387692,0.966182642624386,0.523916301990851,0.364295288292542,1.11235332835329,0.649094787309367,0.522389211897802,0.398873881556595,0.476981248610684,0.571994910780128,0,2.98143611050058,0,2.77712401286075,0.56530794192401,1.25849830862972,1.37559020970034,1.46296476575767,0.516833518338658,0.35576626268671,1.00416183829401,0,0.760272105718513,1.46437234528902,1.10298924103761,0.81014194788176,1.60739510911344,1.79623498100936,2.0270066486998,4.5994991239765,2.84779697870439,2.19842092716489,1.31780417436063,0,0.436094052142534,0,0.633152558322899,0.132409180813219,0.573673241497627,2.12801029319014,1.12135520028461,1.06748995729705,0.24666754841716,0.933633106199299,0.404132016209064,1.47115712802113,0.454072282934794,0,0.468642863667593,0.624320153660641,1.71141546463335,0.747243402759005,2.81842796745036,3.56120477609889,4.3539750077697,0,2.57952066354713,0,0,0.247266929278557,0.910161361938026,0,4.88174730466792,3.75355559615892,2.21651292387346,1.31693286264251,0.30648779579902,0.45071417671979,2.1552114800404,1.97328599257748,0,0.635795703478686,4.80145753735044,1.03052529238439,0,0,2.70042131586026,0.68205903612839,2.77677151668526,0.0920498986422993,0.646584227275248,2.13005755509969,1.41052937518696,0.847802961552438,1.15956511897978,1.09098448236334,0.286804595389004,6.09868530647977,9.80720285578991,7.20402445791014,5.80501908086074,5.55105871926382,3.6497735907583,0,0,0,0,0,3.90412440131485,3.70886318171824,3.37415441836875,3.52940712743661,3.26819166138609,3.79632990577755,3.50561401216427,2.35465758150415,3.07797725557112,0,0,0.4115740113314,0,0,0,0,6.62194649121976,2.33678033231916,0.857839051492628,0.109750285408626,0,2.11110842064425,1.29623823221941,0.651616610620649,1.03993478527958,1.44331342025273,0.463721619900307,0,1.15493158208859,1.38895653772983,1.33177906564219,3.1608175918371,2.57545848628462,0,0.936017060556951,0.594524649154913,0,0.335964256397719,0.141775097242386,0.626909658919938,1.74380363108377,3.83382679165211,0.985326475791887,1.14462964217194,0.414656231081544,0.288239906833923,0.25248486685276,3.30189050319279,0.763976851116555,2.34434894420094,5.13217338068116,4.21592720083626,2.70308752059526,0.285826432630578,1.68196626518041,1.74384027533312,4.03360572015225,0.258543431515556,0,1.690605505112,0.26593811658487,0,2.57207374262142,2.83698264046557,1.5985330740966,0,0,0.823240336780769,1.30294473717494,0,3.95975936466715,0,0,0.199945982364114,0,0,0,0.479249710983165,0,2.85273810081437,0.434343920002738,1.2328579353023,1.07436577943937,3.58672460779287,0.197030760201927,0,0,3.30323011489202,1.30139853857622,3.09315525111078,0.837581326671744,1.91381625495949,0,0,0,0,0,0,0.207970861530807,0,0,0.234282829985426,0,0,0,1.99267679560631,1.29058417979192,1.12948698808508,0,0,0.206768026122887,0.431428401637234,0,2.12189300012382,1.66435439510497,1.81434175997808,0,0.306923946576125,0,0,0,0.160853921143607,0,2.62156479464514,1.06537035187876,1.97105174433142,1.55776328755086,1.97557643381931,2.41718899183244,0.200506470303285,0,1.37777337797528,0.910455840033585,0,0.902399225814824,0.770153371044148,2.35304930753057,4.38417673959782,1.58327443339314,0,0.850468526382578,2.37507507712353,0,0.270946437543853,0,2.29388645740534,2.49322802678617,1.34324852833307,4.16593765627276,6.79732172664741,2.05160100093111,1.64007322849853,0,0.103041011647722,10.4389189892911,8.33345949197939,0.574265537996172,1.30012049207304,0,0.386682873168488,2.00263202249038,2.30255512089194,2.61889487720608,0.537101224341368,1.16013355131383,3.23861184181183,0.712256285173899,0.165284915360978,0,1.65896526242959,0,0,0,1.3940745403212,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0.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| ||
|short_description=p2@ORC1 | |||
}} | }} |
Latest revision as of 12:45, 18 September 2015
Short description: | p2@ORC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ORC1_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000371568, uc001ctt.2, uc001ctu.2, uc009vzd.2, uc010oni.1_5end |
EntrezGene: | ORC1 |
HGNC: | 8487 |
UniProt: | Q13415 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.33e-09 | 253 |
neural cell | 6.15e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.54e-36 | 235 |
disease of cellular proliferation | 5.26e-35 | 239 |
hematologic cancer | 1.11e-27 | 51 |
immune system cancer | 1.11e-27 | 51 |
leukemia | 8.39e-24 | 39 |
organ system cancer | 3.83e-20 | 137 |
myeloid leukemia | 7.25e-19 | 31 |
cell type cancer | 3.22e-15 | 143 |
carcinoma | 2.69e-14 | 106 |
lymphoma | 3.66e-07 | 10 |