FFCP PHASE1:Hg19::chr3:47823298..47823423,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6599 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11104 | |||
|TSSclassifier=strong | |||
|UniProt=Q92922,F8WE13,Q58EY4 | |||
|association_with_transcript=0bp_to_ENST00000254480,ENST00000454240,NM_003074,uc003crq.2_5end | |||
|cluster_id=chr3:47823298..47823423,- | |||
|description=CAGE_peak_1_at_SMARCC1_5end | |||
|id=chr3:47823298..47823423,- | |||
|ontology_enrichment_celltype=CL:0000542!4.66e-08!53;CL:0000051!4.66e-08!53;CL:0000838!1.27e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.66e-08,53;CL:0000051,4.66e-08,53;CL:0000838,1.27e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.72e-23!235;DOID:14566!4.68e-21!239;DOID:2531!1.44e-14!51;DOID:0060083!1.44e-14!51;DOID:0050686!2.67e-14!137;DOID:1240!1.09e-12!39;DOID:3095!1.62e-11!22;DOID:2994!1.62e-11!22;DOID:0050687!2.18e-11!143;DOID:8692!6.06e-10!31;DOID:305!4.49e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.53e-11;22!DOID:2994;1.53e-11;22!DOID:1240;2.35e-10;39!DOID:8692;8.93e-10;31!DOID:2531;4.55e-09;51!DOID:0060083;4.55e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.72e-23,235;DOID:14566,4.68e-21,239;DOID:2531,1.44e-14,51;DOID:0060083,1.44e-14,51;DOID:0050686,2.67e-14,137;DOID:1240,1.09e-12,39;DOID:3095,1.62e-11,22;DOID:2994,1.62e-11,22;DOID:0050687,2.18e-11,143;DOID:8692,6.06e-10,31;DOID:305,4.49e-08,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=11.6274162733156,14.7729361484778,11.6992155399656,5.00366491765652,8.93922188854576,6.10636966870258,7.59899634504932,26.5322346839269,12.0145388971926,28.7508705706765,16.7472280313383,30.8002334703543,22.9477271058755,25.4958687097696,28.5001743126008,26.2206807116192,22.9023920649111,20.4486825308465,22.9328415431538,35.9513489584221,27.7440940092184,23.5091041108566,33.2033745072026,48.7272953259468,47.4551177668355,50.9677416338835,49.4245548488673,51.3194294165189,28.3222279331211,41.453574994499,33.5950987595885,22.0661093874943,28.3133563651555,20.7062245693401,63.445637275267,67.5303854315252,47.8568716115801,43.7656372740183,41.7132450737895,38.1939132459899,20.824139104313,31.74157926986,27.0454346015896,15.1214168330747,17.0044174659964,15.2827958548324,10.2268776238501,14.3908760807639,10.2203102395384,5.75384784644301,8.70946402198942,9.22280696565482,10.3423704220986,17.4280864567633,5.41705946377367,9.97684399575805,13.3724013528344,8.98893937780339,9.79468455586888,12.5162320559677,17.9014395223732,8.57613380485462,11.7683557996763,7.6720455095885,5.5139755339431,11.9150897185139,11.2108004819203,11.0549412712967,9.90817544998383,12.1625753034865,11.502590550034,11.4166067156145,7.59509729858123,16.0554017597076,15.7327181974132,16.1437157041449,19.6575104506366,14.1166279271016,25.2339171114416,13.9656244433212,16.3111675303254,19.7277286065805,43.9990611153307,43.1449502897084,43.5859534393142,43.9532129243502,33.633262911025,38.5084134769504,31.7301538936734,43.8864727086267,42.1217597140992,39.3448916878529,51.2246125687807,76.659370575835,73.9871303135628,43.1949899031126,50.7511206893689,44.8032269534048,38.8586833109072,21.9014308961788,28.681159463756,26.0396293154103,7.79306913631645,17.7142626447426,22.0954430606128,19.9380505125259,30.3300327416817,18.0608760813202,18.9886647437422,17.5948557925933,14.9229009604358,16.808578972633,22.8361307269573,33.9776851673936,32.4060123795428,22.7751778822108,27.9750960329403,22.6794114018536,29.3502842742623,29.626583532141,26.0433381542567,26.6126572445545,34.48170226881,35.4522912897739,28.7340671070395,31.4913745218542,30.3817358860787,43.3454497933175,50.2787568072994,45.0403896075505,19.5045493051169,20.1210257911091,27.490450796359,18.0719576192283,22.560205978615,14.1949588581607,31.811437882044,16.058950719987,54.2629850521749,49.2239262366892,52.3495322731031,30.518124590967,19.3076502795047,20.763928795928,27.2619810669934,27.8607579678828,25.3949704591032,36.7275561430227,42.3276233977295,46.4321876661956,48.6967898048427,33.5491492091389,41.3097196913037,26.0041653285044,32.3014565881628,37.1409356619091,41.1720084077517,36.6951798020447,39.4900551582248,45.5220033359952,26.9895642463128,25.8492515944294,28.3111986755877,38.9722865166621,29.1651101237433,45.0963627834603,48.947403232505,41.8914707397959,58.2603222370356,37.021360723157,46.350041214393,76.4326421129167,58.1670396222488,27.4739252849797,13.9152146474689,19.6277293080099,31.6457942143593,26.1021324881421,23.7627816072899,36.44404400925,53.3744978648525,30.3401084553107,40.4574346019696,30.3099012156798,28.9327568510822,31.3309875225008,31.1134999219199,29.993143274726,35.8984088354869,38.2216120434781,23.9117888882882,47.7958409480123,37.0689042603021,48.4555283122757,27.9691214619204,35.6219520204127,24.5915359198322,22.572054288359,19.7813543422846,20.0235499626366,6.46756327634615,38.212297867573,49.6720523891698,46.5467714013427,26.3386572528503,21.4541457059314,22.5357088359895,32.101307834286,43.7710711080823,23.0641979924053,24.5841005345092,34.2103849536219,32.6676517685851,35.0391134462056,21.0312047654696,43.5442937182467,27.477235455458,42.9137416214995,20.7112271945174,21.1756334432644,36.5659880292113,27.0015623250076,28.4861795081619,22.2249981137791,26.456373697311,41.5866663314056,74.2819870329236,88.3973554704307,64.3714443497132,65.3064646596834,59.5477208066483,86.1346567418959,20.3384392028761,25.0863965895225,19.3388889893473,19.9678209053751,14.4375896333917,26.2641096088453,28.4908126231992,32.7775000641535,26.9117293467041,30.067363284752,33.9296985328868,23.3258163117084,25.508790466295,25.3933123584618,18.4538863656162,26.6459370226547,36.2185129971632,38.2222649602409,30.4212083572394,24.5706804169407,39.5829237476541,74.1658007016613,41.0781384733999,42.7203847643329,34.7908404745343,21.3563331189477,27.4444094683752,41.2944465407042,16.9420318761369,15.5990217791937,41.8560891873293,43.2420410557037,58.7043471179108,31.1831527163919,16.667478452758,22.8304982681518,20.5453143469412,24.0376125386564,26.0990026452641,26.2084776955946,24.3755106153514,17.8094284574876,22.3416230504483,26.3701680870839,29.5543124919399,26.4476884047705,31.0539970123821,31.0377839874444,28.439644186272,36.9044045662574,36.0299883542404,36.1053359599447,36.1303018522442,25.5932245124046,26.9600128583108,23.9501424431787,31.773695245327,24.9284738010452,33.7275190504082,49.3376771119587,40.1083263326618,34.8356857649513,31.6715703606556,17.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| |||
|short_description=p1@SMARCC1 | |||
}} |
Latest revision as of 12:52, 18 September 2015
Short description: | p1@SMARCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SMARCC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000254480, ENST00000454240, NM_003074, uc003crq.2_5end |
EntrezGene: | SMARCC1 |
HGNC: | 11104 |
UniProt: | Q92922F8WE13Q58EY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.66e-08 | 53 |
common lymphoid progenitor | 4.66e-08 | 53 |
lymphoid lineage restricted progenitor cell | 1.27e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.72e-23 | 235 |
disease of cellular proliferation | 4.68e-21 | 239 |
hematologic cancer | 1.44e-14 | 51 |
immune system cancer | 1.44e-14 | 51 |
organ system cancer | 2.67e-14 | 137 |
leukemia | 1.09e-12 | 39 |
germ cell and embryonal cancer | 1.62e-11 | 22 |
germ cell cancer | 1.62e-11 | 22 |
cell type cancer | 2.18e-11 | 143 |
myeloid leukemia | 6.06e-10 | 31 |
carcinoma | 4.49e-08 | 106 |