FFCP PHASE1:Hg19::chr12:48119219..48119230,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8909 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14369 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=86bp_to_ENST00000545824_5end | |||
|cluster_id=chr12:48119219..48119230,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_3_at_ENDOU_5end | |||
|id=chr12:48119219..48119230,- | |||
|ontology_enrichment_celltype=CL:0002537!1.52e-10!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.07e-23;1!UBERON:0009143;2.34e-23;1!UBERON:0008814;2.74e-12;2!UBERON:0010056;2.74e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.21e-18!14;UBERON:0000158!2.21e-18!14;UBERON:0000305!1.02e-12!7;UBERON:0007023!2.66e-12!115;UBERON:0004871!3.87e-11!8;UBERON:0000478!2.47e-10!24;UBERON:0001723!1.60e-08!3;UBERON:0001033!1.60e-08!3;UBERON:0010056!1.60e-08!3;UBERON:0005795!2.18e-08!22;UBERON:0000153!7.60e-08!129;UBERON:0007811!7.60e-08!129;UBERON:0000064!8.49e-08!219;UBERON:0002771!9.85e-08!3;UBERON:0003124!1.13e-07!7;UBERON:0000033!3.05e-07!123;UBERON:0002372!5.75e-07!1;UBERON:0001961!5.75e-07!1;UBERON:0001744!5.75e-07!1;UBERON:0001735!5.75e-07!1;UBERON:0004121!6.45e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;3.59e-30;3!UBERON:0001033;3.59e-30;3!UBERON:0002372;3.67e-23;1!UBERON:0001961;3.67e-23;1!UBERON:0001744;3.67e-23;1!UBERON:0001042;3.67e-23;1!UBERON:0001735;3.67e-23;1!UBERON:0006562;2.74e-12;2!UBERON:0000341;3.43e-12;2!UBERON:0001043;1.08e-08;3!UBERON:0000165;1.02e-07;28!UBERON:0001987;6.50e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,3.10e-30,3;UBERON:0001033,3.10e-30,3;UBERON:0010056,3.10e-30,3;UBERON:0002372,4.10e-23,1;UBERON:0001961,4.10e-23,1;UBERON:0001744,4.10e-23,1;UBERON:0001735,4.10e-23,1;UBERON:0001042,2.04e-20,10;UBERON:0009145,2.04e-20,10;UBERON:0006562,1.24e-18,11;UBERON:0000341,3.62e-12,2;UBERON:0001557,4.37e-11,19;UBERON:0000166,1.16e-09,22;UBERON:0001043,1.12e-08,3;UBERON:0009143,1.12e-08,3;UBERON:0000165,1.78e-07,29;UBERON:0000930,1.78e-07,29;UBERON:0005631,2.85e-07,14;UBERON:0000158,2.85e-07,14;UBERON:0001987,6.50e-07,4;UBERON:0004340,6.50e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97637867556789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21349085126742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,1.18785872333055,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0.975966209950223,0.538651809526579,0,0,0,0.108647371922008,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17052770900203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,15.1681052978112,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,1.0661699095049,0,0,0,0,0,0,3.26575121845442,4.44903291410865,3.03084238565644,0.358611026963382,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p3@ENDOU | |||
}} |
Latest revision as of 12:57, 18 September 2015
Short description: | p3@ENDOU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENDOU_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 86bp_to_ENST00000545824_5end |
EntrezGene: | ENDOU |
HGNC: | 14369 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 3.10e-30 | 3 |
gustatory system | 3.10e-30 | 3 |
future tongue | 3.10e-30 | 3 |
tonsil | 4.10e-23 | 1 |
mucosa-associated lymphoid tissue | 4.10e-23 | 1 |
lymphoid tissue | 4.10e-23 | 1 |
tonsillar ring | 4.10e-23 | 1 |
chordate pharynx | 2.04e-20 | 10 |
pharyngeal region of foregut | 2.04e-20 | 10 |
pharynx | 1.24e-18 | 11 |
throat | 3.62e-12 | 2 |
upper respiratory tract | 4.37e-11 | 19 |
oral opening | 1.16e-09 | 22 |
esophagus | 1.12e-08 | 3 |
esophageal region | 1.12e-08 | 3 |
mouth | 1.78e-07 | 29 |
stomodeum | 1.78e-07 | 29 |
extraembryonic membrane | 2.85e-07 | 14 |
membranous layer | 2.85e-07 | 14 |
placenta | 6.50e-07 | 4 |
allantois | 6.50e-07 | 4 |