FFCP PHASE1:Hg19::chr4:74286913..74286943,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:74286913..74286943,+
|short_description=p28@ALB
|description=CAGE_peak_28_at_ALB_5end
|association_with_transcript=45bp_to_X51363,X51364_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=213 | |EntrezGene=213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=399 | |HGNC=399 | ||
|TSSclassifier=strong | |||
|UniProt=Q16885,Q7KYP4 | |UniProt=Q16885,Q7KYP4 | ||
|association_with_transcript=45bp_to_X51363,X51364_5end | |||
|cluster_id=chr4:74286913..74286943,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_28_at_ALB_5end | |||
|id=chr4:74286913..74286943,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.18e-36!12;CL:0000417!1.18e-36!12;CL:0000668!1.18e-36!12;CL:0000414!1.18e-36!12;CL:0000412!1.18e-36!12;CL:0000182!1.18e-36!12;CL:0000223!6.77e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.93e-37;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.09e-37,12;CL:0000223,7.67e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.49e-26;11!UBERON:0009497;2.34e-22;13!UBERON:0001041;6.60e-10;30!UBERON:0003104;1.62e-09;31!CL:0000223;3.17e-07;58 | |||
|ontology_enrichment_disease=DOID:178!2.74e-10!1;DOID:326!2.74e-10!1;DOID:3978!2.74e-10!1;DOID:3394!2.74e-10!1;DOID:5844!2.74e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!1.44e-40!26;UBERON:0002107!7.03e-38!19;UBERON:0006925!7.03e-38!19;UBERON:0008836!7.03e-38!19;UBERON:0008835!1.47e-32!22;UBERON:0003894!1.47e-32!22;UBERON:0009854!4.29e-31!23;UBERON:0007499!1.63e-28!25;UBERON:0009497!1.63e-28!25;UBERON:0000015!1.63e-28!25;UBERON:0002423!1.63e-28!25;UBERON:0006235!1.63e-28!25;UBERON:0004161!1.63e-28!25;UBERON:0009856!2.26e-27!26;UBERON:0002368!1.33e-24!35;UBERON:0002365!9.15e-23!31;UBERON:0002330!9.15e-23!31;UBERON:0003929!2.91e-22!54;UBERON:0000949!8.18e-19!45;UBERON:0002530!5.86e-17!59;UBERON:0005172!3.81e-15!55;UBERON:0005173!3.81e-15!55;UBERON:0005911!5.23e-14!82;UBERON:0002417!1.65e-13!61;UBERON:0000916!1.65e-13!61;UBERON:0004921!1.23e-09!129;UBERON:0004185!1.23e-09!129;UBERON:0001041!1.62e-09!98;UBERON:0002405!2.36e-09!115;UBERON:0000490!5.86e-09!138;UBERON:0000077!4.05e-08!130;UBERON:0001007!1.14e-07!155;UBERON:0001555!1.14e-07!155;UBERON:0007026!1.14e-07!155;UBERON:0005177!4.73e-07!107;UBERON:0004119!7.35e-07!169;UBERON:0000925!7.35e-07!169;UBERON:0006595!7.35e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.42e-46;19!UBERON:0006925;6.42e-46;19!UBERON:0002423;6.96e-35;25!UBERON:0002365;2.71e-28;31!UBERON:0002330;2.71e-28;31!UBERON:0002368;2.98e-23;33!UBERON:0000949;4.13e-18;43!UBERON:0005172;1.33e-11;52!UBERON:0005173;1.33e-11;52!UBERON:0002530;8.10e-10;57!UBERON:0002417;1.04e-09;58!UBERON:0000916;1.04e-09;58!UBERON:0001007;9.02e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.87e-46,19;UBERON:0006925,6.87e-46,19;UBERON:0008836,6.87e-46,19;UBERON:0008835,1.26e-39,22;UBERON:0003894,1.26e-39,22;UBERON:0009854,6.70e-38,23;UBERON:0007499,7.32e-35,25;UBERON:0009497,7.32e-35,25;UBERON:0000015,7.32e-35,25;UBERON:0002423,7.32e-35,25;UBERON:0006235,7.32e-35,25;UBERON:0004161,7.32e-35,25;UBERON:0009856,1.62e-33,26;UBERON:0002365,4.30e-28,31;UBERON:0002330,4.30e-28,31;UBERON:0002368,7.27e-25,35;UBERON:0000949,2.69e-19,45;UBERON:0003929,4.84e-16,54;UBERON:0005172,4.84e-16,54;UBERON:0005173,4.84e-16,54;UBERON:0002530,1.17e-14,59;UBERON:0002417,2.07e-14,60;UBERON:0000916,2.07e-14,60;UBERON:0005911,1.85e-10,82;UBERON:0001041,7.75e-10,87;UBERON:0005177,2.02e-08,101;UBERON:0009569,1.49e-07,112;UBERON:0003914,3.26e-07,117;UBERON:0004921,4.39e-07,118;UBERON:0005256,6.72e-07,122 | |||
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|short_description=p28@ALB | |||
}} | }} |
Latest revision as of 13:24, 18 September 2015
Short description: | p28@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 45bp_to_X51363, X51364_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | Q16885Q7KYP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.09e-37 | 12 |
endodermal cell | 7.67e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 6.87e-46 | 19 |
digestive gland | 6.87e-46 | 19 |
liver bud | 6.87e-46 | 19 |
hepatic diverticulum | 1.26e-39 | 22 |
liver primordium | 1.26e-39 | 22 |
digestive tract diverticulum | 6.70e-38 | 23 |
epithelial sac | 7.32e-35 | 25 |
epithelium of foregut-midgut junction | 7.32e-35 | 25 |
anatomical boundary | 7.32e-35 | 25 |
hepatobiliary system | 7.32e-35 | 25 |
foregut-midgut junction | 7.32e-35 | 25 |
septum transversum | 7.32e-35 | 25 |
sac | 1.62e-33 | 26 |
exocrine gland | 4.30e-28 | 31 |
exocrine system | 4.30e-28 | 31 |
endocrine gland | 7.27e-25 | 35 |
endocrine system | 2.69e-19 | 45 |
gut epithelium | 4.84e-16 | 54 |
abdomen element | 4.84e-16 | 54 |
abdominal segment element | 4.84e-16 | 54 |
gland | 1.17e-14 | 59 |
abdominal segment of trunk | 2.07e-14 | 60 |
abdomen | 2.07e-14 | 60 |
endo-epithelium | 1.85e-10 | 82 |
foregut | 7.75e-10 | 87 |
trunk region element | 2.02e-08 | 101 |
subdivision of trunk | 1.49e-07 | 112 |
epithelial tube | 3.26e-07 | 117 |
subdivision of digestive tract | 4.39e-07 | 118 |
trunk mesenchyme | 6.72e-07 | 122 |