FFCP PHASE1:Hg19::chr21:43283523..43283544,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63977 | |EntrezGene=63977 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13999 | |HGNC=13999 | ||
|TSSclassifier=strong | |||
|UniProt=E7ER26 | |UniProt=E7ER26 | ||
|association_with_transcript=-112bp_to_ENST00000447016_5end | |association_with_transcript=-112bp_to_ENST00000447016_5end | ||
|cluster_id=chr21:43283523..43283544,- | |||
|coexpression_cluster_id=C62 | |coexpression_cluster_id=C62 | ||
|description=CAGE_peak_3_at_PRDM15_5end | |description=CAGE_peak_3_at_PRDM15_5end | ||
| Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!1.35e-36!24;CL:0000826!1.35e-36!24;CL:0000819!1.08e-19!1;CL:0000838!8.55e-17!52;CL:0000542!1.79e-16!53;CL:0000051!1.79e-16!53;CL:0000785!1.57e-10!2;CL:0000955!1.57e-10!2;CL:0000818!1.57e-10!2;CL:0000954!1.57e-10!2;CL:0000816!1.57e-10!2;CL:0000817!1.93e-07!3;CL:0002087!4.49e-07!119;CL:0002031!8.97e-07!124 | |ontology_enrichment_celltype=CL:0000945!1.35e-36!24;CL:0000826!1.35e-36!24;CL:0000819!1.08e-19!1;CL:0000838!8.55e-17!52;CL:0000542!1.79e-16!53;CL:0000051!1.79e-16!53;CL:0000785!1.57e-10!2;CL:0000955!1.57e-10!2;CL:0000818!1.57e-10!2;CL:0000954!1.57e-10!2;CL:0000816!1.57e-10!2;CL:0000817!1.93e-07!3;CL:0002087!4.49e-07!119;CL:0002031!8.97e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.08e-34;24!CL:0000785;2.58e-34;1!CL:0000819;2.58e-34;1!CL:0000542;2.03e-12;53 | |ontology_enrichment_celltype_v019=CL:0000945;1.08e-34;24!CL:0000785;2.58e-34;1!CL:0000819;2.58e-34;1!CL:0000542;2.03e-12;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.05e-34,24;CL:0000826,1.05e-34,24;CL:0000819,2.58e-34,1;CL:0000785,6.48e-18,2;CL:0000955,6.48e-18,2;CL:0000818,6.48e-18,2;CL:0000954,6.48e-18,2;CL:0000816,6.48e-18,2;CL:0000838,2.36e-16,52;CL:0000542,4.70e-16,53;CL:0000051,4.70e-16,53;CL:0000817,2.07e-12,3;CL:0002087,1.44e-07,115;CL:0002031,2.87e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000954;6.48e-18;2!CL:0000051;2.03e-12;53 | |ontology_enrichment_development_v019=CL:0000954;6.48e-18;2!CL:0000051;2.03e-12;53 | ||
|ontology_enrichment_disease=DOID:0060058!1.53e-29!10;DOID:0060073!1.08e-19!1;DOID:8675!1.08e-19!1;DOID:4960!3.91e-19!1;DOID:0070004!3.91e-19!1;DOID:2531!5.18e-09!51;DOID:0060083!5.18e-09!51 | |ontology_enrichment_disease=DOID:0060058!1.53e-29!10;DOID:0060073!1.08e-19!1;DOID:8675!1.08e-19!1;DOID:4960!3.91e-19!1;DOID:0070004!3.91e-19!1;DOID:2531!5.18e-09!51;DOID:0060083!5.18e-09!51 | ||
|ontology_enrichment_disease_v019=DOID:0060058;4.93e-53;10!DOID:0060073;2.58e-34;1!DOID:8675;2.58e-34;1!DOID:2531;3.60e-07;51!DOID:0060083;3.60e-07;51 | |ontology_enrichment_disease_v019=DOID:0060058;4.93e-53;10!DOID:0060073;2.58e-34;1!DOID:8675;2.58e-34;1!DOID:2531;3.60e-07;51!DOID:0060083;3.60e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.61e-53,10;DOID:0060073,2.58e-34,1;DOID:8675,2.58e-34,1;DOID:2531,5.74e-11,51;DOID:0060083,5.74e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0002372!2.25e-19!1;UBERON:0001961!2.25e-19!1;UBERON:0001744!2.25e-19!1;UBERON:0001735!2.25e-19!1;UBERON:0001154!2.71e-19!1;UBERON:0001153!2.71e-19!1;UBERON:0001155!6.61e-09!9;UBERON:0000059!1.90e-07!11 | |ontology_enrichment_uberon=UBERON:0002372!2.25e-19!1;UBERON:0001961!2.25e-19!1;UBERON:0001744!2.25e-19!1;UBERON:0001735!2.25e-19!1;UBERON:0001154!2.71e-19!1;UBERON:0001153!2.71e-19!1;UBERON:0001155!6.61e-09!9;UBERON:0000059!1.90e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;8.34e-34;1!UBERON:0001961;8.34e-34;1!UBERON:0001744;8.34e-34;1!UBERON:0001042;8.34e-34;1!UBERON:0001735;8.34e-34;1!UBERON:0006562;1.17e-17;2 | |ontology_enrichment_uberon_v019=UBERON:0002372;8.34e-34;1!UBERON:0001961;8.34e-34;1!UBERON:0001744;8.34e-34;1!UBERON:0001042;8.34e-34;1!UBERON:0001735;8.34e-34;1!UBERON:0006562;1.17e-17;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,9.85e-34,1;UBERON:0001961,9.85e-34,1;UBERON:0001744,9.85e-34,1;UBERON:0001735,9.85e-34,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0569313427542,4.97592313705975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,2.21552649829925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,6.75082720097964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82688897571344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0776328482334,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0569313427542,4.97592313705975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,2.21552649829925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,6.75082720097964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82688897571344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0776328482334,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@PRDM15 | |short_description=p3@PRDM15 | ||
}} | }} | ||
Latest revision as of 13:25, 18 September 2015
| Short description: | p3@PRDM15 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_PRDM15_5end |
| Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
| Association with transcript: | -112bp_to_ENST00000447016_5end |
| EntrezGene: | PRDM15 |
| HGNC: | 13999 |
| UniProt: | E7ER26 |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphocyte of B lineage | 1.05e-34 | 24 |
| pro-B cell | 1.05e-34 | 24 |
| B-1 B cell | 2.58e-34 | 1 |
| mature B cell | 6.48e-18 | 2 |
| pre-B-II cell | 6.48e-18 | 2 |
| transitional stage B cell | 6.48e-18 | 2 |
| small pre-B-II cell | 6.48e-18 | 2 |
| immature B cell | 6.48e-18 | 2 |
| lymphoid lineage restricted progenitor cell | 2.36e-16 | 52 |
| lymphocyte | 4.70e-16 | 53 |
| common lymphoid progenitor | 4.70e-16 | 53 |
| precursor B cell | 2.07e-12 | 3 |
| nongranular leukocyte | 1.44e-07 | 115 |
| hematopoietic lineage restricted progenitor cell | 2.87e-07 | 120 |
| Ontology term | p-value | n |
|---|---|---|
| tonsil | 9.85e-34 | 1 |
| mucosa-associated lymphoid tissue | 9.85e-34 | 1 |
| lymphoid tissue | 9.85e-34 | 1 |
| tonsillar ring | 9.85e-34 | 1 |
| Ontology term | p-value | n |
|---|---|---|
| lymphoma | 4.61e-53 | 10 |
| lymphatic system cancer | 2.58e-34 | 1 |
| lymphosarcoma | 2.58e-34 | 1 |
| hematologic cancer | 5.74e-11 | 51 |
| immune system cancer | 5.74e-11 | 51 |