FFCP PHASE1:Hg19::chr1:53550333..53550383,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=127435 | |EntrezGene=127435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=23174 | |HGNC=23174 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=78bp_to_BC024024_5end | |association_with_transcript=78bp_to_BC024024_5end | ||
|cluster_id=chr1:53550333..53550383,+ | |||
|description=CAGE_peak_2_at_PODN_5end | |description=CAGE_peak_2_at_PODN_5end | ||
|id=chr1:53550333..53550383,+ | |id=chr1:53550333..53550383,+ | ||
|ontology_enrichment_celltype=CL:0000057!9.83e-09!75;CL:0002334!2.21e-08!12;CL:0002620!1.47e-07!23 | |ontology_enrichment_celltype=CL:0000057!9.83e-09!75;CL:0002334!2.21e-08!12;CL:0002620!1.47e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.09e-09;13!CL:0000135;9.34e-09;3!CL:0000388;9.34e-09;3!CL:0002615;1.40e-08;3!CL:0002579;1.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.06e-08,3;CL:0000388,1.06e-08,3;CL:0002615,1.40e-08,3;CL:0000136,1.15e-07,15;CL:0002579,1.58e-07,3;CL:0000057,2.14e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;5.65e-08;5!DOID:450;5.65e-08;5!DOID:66;5.65e-08;5!DOID:423;5.65e-08;5!DOID:0080000;5.65e-08;5!DOID:11722;5.65e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.35e-08,5;DOID:450,7.35e-08,5;DOID:66,7.35e-08,5;DOID:423,7.35e-08,5;DOID:0080000,7.35e-08,5;DOID:11722,7.35e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.19e-22!115;UBERON:0000475!2.69e-09!365;UBERON:0004457!6.10e-08!12;UBERON:0000042!6.10e-08!12;UBERON:0003688!1.63e-07!6;UBERON:0002358!1.63e-07!6;UBERON:0003684!1.63e-07!6;UBERON:0001178!1.63e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.18e-17;9!UBERON:0000042;4.18e-17;9!UBERON:0003688;1.80e-14;6!UBERON:0002358;1.80e-14;6!UBERON:0003684;1.80e-14;6!UBERON:0001178;1.80e-14;6!UBERON:0007846;9.34e-09;3!UBERON:0000043;9.34e-09;3!UBERON:0007845;9.34e-09;3!UBERON:0001443;1.36e-07;11!UBERON:0003135;1.49e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.06e-14,6;UBERON:0002358,2.06e-14,6;UBERON:0003684,2.06e-14,6;UBERON:0001178,2.06e-14,6;UBERON:0004457,2.16e-12,12;UBERON:0000042,2.16e-12,12;UBERON:0004458,8.26e-09,49;UBERON:0004797,9.38e-09,7;UBERON:0007846,1.06e-08,3;UBERON:0000043,1.06e-08,3;UBERON:0007845,1.06e-08,3;UBERON:0001443,1.14e-07,11;UBERON:0003135,1.17e-07,11;UBERON:0002323,6.10e-07,46 | |||
|phase1_expression=2.36181893051724,7.92171938396638,2.81908808191942,8.00586386825043,4.02264984984559,4.36169262050184,5.06599756336621,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.255725123687061,6.14446559053763,0,2.02785126545153,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.12663051166458,1.05927344650575,11.4734648299525,1.41867352879343,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,0,0,0.113432183160021,3.04962380671065,2.13557388818567,1.48352330811693,3.00091096084402,0.721367704669072,2.83404594050192,0.558350568994769,0.337552664482532,0.194874010322397,3.5340728394176,0.736399189138395,1.77810662500693,0.355009592516614,0.403008392910561,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0,4.28933980974443,0,0,0,1.06617584622764,0,0,0,0.099972991182057,0,0,0,0,2.29723871668228,0,0,0,0,0,0,0,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,2.9115920614313,1.96271887676878,1.73472656537328,0.585707074963566,0.300946099727719,0,2.0694614258501,0,0,0.868836144680828,0,0,0,0,0,0,0,0,0.744323423456331,1.84154367945675,3.36792113319688,1.66580894032411,2.04682899626681,2.2519548960105,1.48418066444991,0.462629081407967,0.177561725313127,0.328508624055237,0,0.116210378459959,0,0,0,1.14814448164607,0.546273504020151,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,3.21367859688319,0,0,0.15350367472613,0,0,0,0,0.267096106940212,0,0,0,0,0.464845549297286,2.51849877464512,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,1.28381696410176,0,0,0,0,0,0,0,0,0,0.974853958525138,0,0.682499557039929,6.50464986987079,2.26016233240486,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,7.81098250601357,45.7719901214264,0.379473173765715,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0,7.77067154179172,0.552567831062295,0,0.102268682502155,0,3.73247505194169,0,0,0,1.97286811273867,0,0,0,0.0927680981618513,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,1.38510465306835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,2.4441205797345,0,0,0,0,4.81546588379273,0,0,0,0,3.15667522279512,3.62972148145992,0,0.884612114798832,0,0,0,0,0,0,0,0,0.173559738335131,0,0,2.62090002363045,0.343972064943233,0,0,0,0.872901148395775,0,4.06765333404958,0,0,0,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,4.46851842035607,7.56229399238556,0.717873024576814,0.199679000498991,1.28767814440971,0,0.201550417460179,1.80149941771202,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.0524545881349981,0,0,0,4.2881719582402,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0,0,0,0.13223260174269,0,0,0.427149650270779,0.157204305099666,4.55662960881915,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0.467426619694449,0.554805861502613,0,0.251567901752575,0.889811221596536,0.686520205190771,2.26846385644859,0,0.147855149989634,0,0,0,1.65882483136342,0.797525143673985,0,0.150257608997218,0,0,0,0,0.464033759878494,0.398095888698616,0,0,0.673498977531838,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0.308801447160972,0,0.883445729729405,0.38582807654183,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.05802783107205,8.57487336588961,0,1.41696576325585,0,0,0.252071696221718,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.676892955143315,0,1.56302802246618,0,0,0,0.0675375846183947,0,0,0,1.09394961803644,0,8.9318012110073,0,0,0,0.336283722218824,1.82089681270989,0.455324382702595,0,0,0,0,0,0,0,0.863424021355654,0,0,0,0,0,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,1.94284397223656,0,0,0,0,0,0,0,0.218559560503957,0,3.67722482630858,0,1.37415926980462,0.594092800654172,1.2679671827502,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0,0.436350690340377,0,3.34795516350076,4.15958065768276,8.21990468035199,0,0,0.253397002022874,0,0,0,0,1.81868875723775,2.94760543171796,0.829169439458779,0,1.0661699095049,0.714193294391221,0.193766729508018,0,0,0.25458863311266,3.63810940124795,0.870866991587845,1.02669990325584,0.0673520530145875,0.573777643141411,3.65926392200615,0,0,0,0,4.69281884806909,0.977931553462932,0.406896178315738,0.665756774185513,2.01273793591026,0 | |phase1_expression=2.36181893051724,7.92171938396638,2.81908808191942,8.00586386825043,4.02264984984559,4.36169262050184,5.06599756336621,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.255725123687061,6.14446559053763,0,2.02785126545153,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.12663051166458,1.05927344650575,11.4734648299525,1.41867352879343,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,0,0,0.113432183160021,3.04962380671065,2.13557388818567,1.48352330811693,3.00091096084402,0.721367704669072,2.83404594050192,0.558350568994769,0.337552664482532,0.194874010322397,3.5340728394176,0.736399189138395,1.77810662500693,0.355009592516614,0.403008392910561,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0,4.28933980974443,0,0,0,1.06617584622764,0,0,0,0.099972991182057,0,0,0,0,2.29723871668228,0,0,0,0,0,0,0,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,2.9115920614313,1.96271887676878,1.73472656537328,0.585707074963566,0.300946099727719,0,2.0694614258501,0,0,0.868836144680828,0,0,0,0,0,0,0,0,0.744323423456331,1.84154367945675,3.36792113319688,1.66580894032411,2.04682899626681,2.2519548960105,1.48418066444991,0.462629081407967,0.177561725313127,0.328508624055237,0,0.116210378459959,0,0,0,1.14814448164607,0.546273504020151,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,3.21367859688319,0,0,0.15350367472613,0,0,0,0,0.267096106940212,0,0,0,0,0.464845549297286,2.51849877464512,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,1.28381696410176,0,0,0,0,0,0,0,0,0,0.974853958525138,0,0.682499557039929,6.50464986987079,2.26016233240486,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,7.81098250601357,45.7719901214264,0.379473173765715,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0,7.77067154179172,0.552567831062295,0,0.102268682502155,0,3.73247505194169,0,0,0,1.97286811273867,0,0,0,0.0927680981618513,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,1.38510465306835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,2.4441205797345,0,0,0,0,4.81546588379273,0,0,0,0,3.15667522279512,3.62972148145992,0,0.884612114798832,0,0,0,0,0,0,0,0,0.173559738335131,0,0,2.62090002363045,0.343972064943233,0,0,0,0.872901148395775,0,4.06765333404958,0,0,0,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,4.46851842035607,7.56229399238556,0.717873024576814,0.199679000498991,1.28767814440971,0,0.201550417460179,1.80149941771202,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.0524545881349981,0,0,0,4.2881719582402,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0,0,0,0.13223260174269,0,0,0.427149650270779,0.157204305099666,4.55662960881915,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0.467426619694449,0.554805861502613,0,0.251567901752575,0.889811221596536,0.686520205190771,2.26846385644859,0,0.147855149989634,0,0,0,1.65882483136342,0.797525143673985,0,0.150257608997218,0,0,0,0,0.464033759878494,0.398095888698616,0,0,0.673498977531838,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0.308801447160972,0,0.883445729729405,0.38582807654183,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.05802783107205,8.57487336588961,0,1.41696576325585,0,0,0.252071696221718,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.676892955143315,0,1.56302802246618,0,0,0,0.0675375846183947,0,0,0,1.09394961803644,0,8.9318012110073,0,0,0,0.336283722218824,1.82089681270989,0.455324382702595,0,0,0,0,0,0,0,0.863424021355654,0,0,0,0,0,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,1.94284397223656,0,0,0,0,0,0,0,0.218559560503957,0,3.67722482630858,0,1.37415926980462,0.594092800654172,1.2679671827502,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0,0.436350690340377,0,3.34795516350076,4.15958065768276,8.21990468035199,0,0,0.253397002022874,0,0,0,0,1.81868875723775,2.94760543171796,0.829169439458779,0,1.0661699095049,0.714193294391221,0.193766729508018,0,0,0.25458863311266,3.63810940124795,0.870866991587845,1.02669990325584,0.0673520530145875,0.573777643141411,3.65926392200615,0,0,0,0,4.69281884806909,0.977931553462932,0.406896178315738,0.665756774185513,2.01273793591026,0 | ||
|short_description=p2@PODN | |short_description=p2@PODN | ||
}} | }} |
Latest revision as of 13:27, 18 September 2015
Short description: | p2@PODN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PODN_5end |
Coexpression cluster: | NA |
Association with transcript: | 78bp_to_BC024024_5end |
EntrezGene: | PODN |
HGNC: | 23174 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.06e-08 | 3 |
tendon cell | 1.06e-08 | 3 |
adipocyte of omentum tissue | 1.40e-08 | 3 |
fat cell | 1.15e-07 | 15 |
omentum preadipocyte | 1.58e-07 | 3 |
fibroblast | 2.14e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.06e-14 | 6 |
peritoneum | 2.06e-14 | 6 |
abdominal cavity | 2.06e-14 | 6 |
visceral peritoneum | 2.06e-14 | 6 |
cavity lining | 2.16e-12 | 12 |
serous membrane | 2.16e-12 | 12 |
body cavity or lining | 8.26e-09 | 49 |
blood vessel layer | 9.38e-09 | 7 |
dense regular connective tissue | 1.06e-08 | 3 |
tendon | 1.06e-08 | 3 |
regular connective tissue | 1.06e-08 | 3 |
chest | 1.14e-07 | 11 |
male reproductive organ | 1.17e-07 | 11 |
body cavity | 6.10e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.35e-08 | 5 |
myotonic disease | 7.35e-08 | 5 |
muscle tissue disease | 7.35e-08 | 5 |
myopathy | 7.35e-08 | 5 |
muscular disease | 7.35e-08 | 5 |
myotonic dystrophy | 7.35e-08 | 5 |