FFCP PHASE1:Hg19::chr6:37140294..37140310,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5292 | |EntrezGene=5292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8986 | |HGNC=8986 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000479509_5end | |association_with_transcript=24bp_to_ENST00000479509_5end | ||
|cluster_id=chr6:37140294..37140310,+ | |||
|description=CAGE_peak_6_at_PIM1_5end | |description=CAGE_peak_6_at_PIM1_5end | ||
|id=chr6:37140294..37140310,+ | |id=chr6:37140294..37140310,+ | ||
|ontology_enrichment_celltype=CL:0000037!7.64e-33!172;CL:0000566!7.64e-33!172;CL:0000988!1.11e-29!182;CL:0002032!1.57e-29!165;CL:0000837!1.57e-29!165;CL:0000791!2.31e-24!18;CL:0000789!2.31e-24!18;CL:0002420!2.31e-24!18;CL:0002419!2.31e-24!18;CL:0000790!2.31e-24!18;CL:0000763!2.48e-19!112;CL:0000049!2.48e-19!112;CL:0000738!1.83e-18!140;CL:0000084!8.38e-18!25;CL:0000827!8.38e-18!25;CL:0002087!1.45e-16!119;CL:0000625!1.85e-16!11;CL:0002031!3.64e-16!124;CL:0000838!7.26e-10!52;CL:0000542!1.50e-09!53;CL:0000051!1.50e-09!53;CL:0002057!1.91e-09!42;CL:0000766!9.29e-09!76;CL:0000624!9.36e-09!6;CL:0000860!1.98e-08!45;CL:0000839!9.04e-08!70 | |ontology_enrichment_celltype=CL:0000037!7.64e-33!172;CL:0000566!7.64e-33!172;CL:0000988!1.11e-29!182;CL:0002032!1.57e-29!165;CL:0000837!1.57e-29!165;CL:0000791!2.31e-24!18;CL:0000789!2.31e-24!18;CL:0002420!2.31e-24!18;CL:0002419!2.31e-24!18;CL:0000790!2.31e-24!18;CL:0000763!2.48e-19!112;CL:0000049!2.48e-19!112;CL:0000738!1.83e-18!140;CL:0000084!8.38e-18!25;CL:0000827!8.38e-18!25;CL:0002087!1.45e-16!119;CL:0000625!1.85e-16!11;CL:0002031!3.64e-16!124;CL:0000838!7.26e-10!52;CL:0000542!1.50e-09!53;CL:0000051!1.50e-09!53;CL:0002057!1.91e-09!42;CL:0000766!9.29e-09!76;CL:0000624!9.36e-09!6;CL:0000860!1.98e-08!45;CL:0000839!9.04e-08!70 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.41e-29;18!CL:0000789;3.41e-29;18!CL:0002419;3.41e-29;18!CL:0000625;5.00e-26;11!CL:0000084;5.02e-20;25!CL:0000624;1.32e-07;6!CL:0000763;1.34e-07;100!CL:0000764;2.65e-07;2!CL:0000558;2.65e-07;2!CL:0000988;7.59e-07;177!CL:0000860;8.82e-07;33!CL:0002057;8.82e-07;33 | |ontology_enrichment_celltype_v019=CL:0000791;3.41e-29;18!CL:0000789;3.41e-29;18!CL:0002419;3.41e-29;18!CL:0000625;5.00e-26;11!CL:0000084;5.02e-20;25!CL:0000624;1.32e-07;6!CL:0000763;1.34e-07;100!CL:0000764;2.65e-07;2!CL:0000558;2.65e-07;2!CL:0000988;7.59e-07;177!CL:0000860;8.82e-07;33!CL:0002057;8.82e-07;33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.12e-29,18;CL:0000789,2.12e-29,18;CL:0002420,2.12e-29,18;CL:0002419,2.12e-29,18;CL:0000790,2.12e-29,18;CL:0000037,1.57e-26,168;CL:0000625,4.90e-26,11;CL:0002032,2.26e-25,161;CL:0000837,2.26e-25,161;CL:0000988,1.37e-24,177;CL:0000084,3.61e-20,25;CL:0000827,3.61e-20,25;CL:0000763,7.25e-15,108;CL:0000049,7.25e-15,108;CL:0002087,1.54e-12,115;CL:0000738,1.55e-12,136;CL:0002031,5.95e-12,120;CL:0000838,1.45e-10,52;CL:0000542,2.71e-10,53;CL:0000051,2.71e-10,53;CL:0000624,9.05e-08,6;CL:0000764,2.35e-07,2;CL:0000765,2.35e-07,2;CL:0000050,2.35e-07,2;CL:0000038,2.35e-07,2;CL:0000558,2.35e-07,2;CL:0000547,2.35e-07,2;CL:0000549,2.35e-07,2;CL:0000550,2.35e-07,2;CL:0000552,2.35e-07,2;CL:0000134,9.17e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000790;3.41e-29;18 | |ontology_enrichment_development_v019=CL:0000790;3.41e-29;18 | ||
|ontology_enrichment_disease=DOID:8692!2.85e-12!31;DOID:1240!1.27e-09!39;DOID:2531!2.36e-09!51;DOID:0060083!2.36e-09!51;DOID:1036!1.22e-08!8 | |ontology_enrichment_disease=DOID:8692!2.85e-12!31;DOID:1240!1.27e-09!39;DOID:2531!2.36e-09!51;DOID:0060083!2.36e-09!51;DOID:1036!1.22e-08!8 | ||
|ontology_enrichment_disease_v019=DOID:8692;5.59e-14;31!DOID:1036;5.33e-12;8!DOID:1240;6.62e-09;39 | |ontology_enrichment_disease_v019=DOID:8692;5.59e-14;31!DOID:1036;5.33e-12;8!DOID:1240;6.62e-09;39 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,1.72e-14,31;DOID:1036,3.96e-12,8;DOID:1240,7.37e-11,39;DOID:2531,1.38e-07,51;DOID:0060083,1.38e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.50e-13!102;UBERON:0003061!8.50e-13!102;UBERON:0002193!3.00e-11!112;UBERON:0000178!3.40e-10!15;UBERON:0000179!3.40e-10!15;UBERON:0000463!3.40e-10!15 | |ontology_enrichment_uberon=UBERON:0002390!8.50e-13!102;UBERON:0003061!8.50e-13!102;UBERON:0002193!3.00e-11!112;UBERON:0000178!3.40e-10!15;UBERON:0000179!3.40e-10!15;UBERON:0000463!3.40e-10!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.08e-13;15!UBERON:0000179;1.08e-13;15!UBERON:0000463;1.08e-13;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.08e-13;15!UBERON:0000179;1.08e-13;15!UBERON:0000463;1.08e-13;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.60e-14,15;UBERON:0000179,8.60e-14,15;UBERON:0000463,8.60e-14,15;UBERON:0002390,7.18e-07,98;UBERON:0003061,7.18e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50709987588466,0.767658796194425,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.401088894940283,0.434021741431704,0,0.32389366601898,0,0.145398238779565,1.13362783106643,0.485168122375632,0,0,0.619412741790207,2.58923153089935,3.33008918487831,4.25668013799453,0,0.645484683583826,0,0.752969358170419,0.545812300115692,0.224723484445085,0.306083892370903,0.320929027076094,0,4.61791820261403,5.98390972864896,7.2458207590558,0,0,0,3.01498398308092,2.60741459210101,4.12658804939722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0,0.983548850569165,1.57204305099666,1.64481199199607,42.7997428200136,1.95553359980154,1.4203434172042,0,10.3611724903211,0.589211814949674,0.886135578334485,0.541607727530031,16.0114149657094,16.3874777925447,9.04408475320219,11.6067007470056,9.85330491499179,3.11401782640327,2.1403266247177,0,14.1636678371958,3.44898444241729,4.12352934579156,2.02415753615602,4.45991580053735,5.20866763085135,3.8018081777935,2.10805166708882,2.55973222308837,9.99445812418767,6.39298580518846,7.39015197228942,0.80642697289893,2.13952156626806,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.788123040807709,1.94064817373566,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,1.07857100409308,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60445740956463,4.96727356947311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0.43050537267123,0,0,0,0.507447609232169,3.82318603571188,3.41788312304498,1.90585420366231,1.64544909234478,1.94541993357815,2.16012574895246,3.17250070517708,0,0,0,0,0,0,0,0.997896857164083,2.68107518185313,1.05836791361941,0,3.65036331547496,0,0,0,2.20079311142084,2.08764497634809,0.403599414382095,0,0,0,0,0,0,0,2.46174797895425,1.35227839237992,0,1.4098700508785,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0.627921025580099,0.166211681900156,1.1279783030859,1.9606253431774,1.51039428278258,1.51802986179348,1.74830236878417,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0.0882561266915003,0.225980740780532,0,0,0,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0.542999601753713,0,0,0,5.17182880720835,0,0,0,1.32506888912221,0,0,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.156986185701028,0.314231179832004,0,0,0,0,0.142953088353313,0,0.116241425368125,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0.470317296361523,0,0,0.392616934229891,0,0,0,0.657887425858975,0.644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0.112131862580613,0,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0.179650404213174,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50709987588466,0.767658796194425,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.401088894940283,0.434021741431704,0,0.32389366601898,0,0.145398238779565,1.13362783106643,0.485168122375632,0,0,0.619412741790207,2.58923153089935,3.33008918487831,4.25668013799453,0,0.645484683583826,0,0.752969358170419,0.545812300115692,0.224723484445085,0.306083892370903,0.320929027076094,0,4.61791820261403,5.98390972864896,7.2458207590558,0,0,0,3.01498398308092,2.60741459210101,4.12658804939722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0,0.983548850569165,1.57204305099666,1.64481199199607,42.7997428200136,1.95553359980154,1.4203434172042,0,10.3611724903211,0.589211814949674,0.886135578334485,0.541607727530031,16.0114149657094,16.3874777925447,9.04408475320219,11.6067007470056,9.85330491499179,3.11401782640327,2.1403266247177,0,14.1636678371958,3.44898444241729,4.12352934579156,2.02415753615602,4.45991580053735,5.20866763085135,3.8018081777935,2.10805166708882,2.55973222308837,9.99445812418767,6.39298580518846,7.39015197228942,0.80642697289893,2.13952156626806,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.788123040807709,1.94064817373566,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,1.07857100409308,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60445740956463,4.96727356947311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0.43050537267123,0,0,0,0.507447609232169,3.82318603571188,3.41788312304498,1.90585420366231,1.64544909234478,1.94541993357815,2.16012574895246,3.17250070517708,0,0,0,0,0,0,0,0.997896857164083,2.68107518185313,1.05836791361941,0,3.65036331547496,0,0,0,2.20079311142084,2.08764497634809,0.403599414382095,0,0,0,0,0,0,0,2.46174797895425,1.35227839237992,0,1.4098700508785,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0.627921025580099,0.166211681900156,1.1279783030859,1.9606253431774,1.51039428278258,1.51802986179348,1.74830236878417,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0.0882561266915003,0.225980740780532,0,0,0,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0.542999601753713,0,0,0,5.17182880720835,0,0,0,1.32506888912221,0,0,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.156986185701028,0.314231179832004,0,0,0,0,0.142953088353313,0,0.116241425368125,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0.470317296361523,0,0,0.392616934229891,0,0,0,0.657887425858975,0.644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0.112131862580613,0,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0.179650404213174,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p6@PIM1 | |short_description=p6@PIM1 | ||
}} | }} |
Latest revision as of 14:23, 18 September 2015
Short description: | p6@PIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PIM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000479509_5end |
EntrezGene: | PIM1 |
HGNC: | 8986 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 8.60e-14 | 15 |
haemolymphatic fluid | 8.60e-14 | 15 |
organism substance | 8.60e-14 | 15 |
hematopoietic system | 7.18e-07 | 98 |
blood island | 7.18e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.72e-14 | 31 |
chronic leukemia | 3.96e-12 | 8 |
leukemia | 7.37e-11 | 39 |
hematologic cancer | 1.38e-07 | 51 |
immune system cancer | 1.38e-07 | 51 |