FFCP PHASE1:Hg19::chr1:171526523..171526585,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:171526523..171526585,+
|short_description=p12@PRRC2C
|description=CAGE_peak_12_at_PRRC2C_5end
|association_with_transcript=144bp_to_uc010pmi.1_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23215 | |EntrezGene=23215 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24903 | |HGNC=24903 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=144bp_to_uc010pmi.1_5end | |||
|cluster_id=chr1:171526523..171526585,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_12_at_PRRC2C_5end | |||
|id=chr1:171526523..171526585,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.16e-07!45;CL:0002057!2.31e-07!42;CL:0002194!4.23e-07!63;CL:0000576!4.23e-07!63;CL:0000040!4.23e-07!63;CL:0000559!4.23e-07!63;CL:0000766!4.85e-07!76;CL:0002087!7.88e-07!119;CL:0002009!9.66e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.74e-10;33!CL:0002057;7.74e-10;33!CL:0000473;4.19e-08;39!CL:0000234;4.19e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.51e-08,42;CL:0002057,3.51e-08,42;CL:0000473,4.34e-08,48;CL:0000234,4.34e-08,48;CL:0002087,2.34e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.57e-13!239;DOID:162!5.29e-13!235;DOID:0050687!1.77e-12!143;DOID:305!1.17e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.38e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p12@PRRC2C | |||
}} | }} |
Latest revision as of 15:28, 18 September 2015
Short description: | p12@PRRC2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PRRC2C_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 144bp_to_uc010pmi.1_5end |
EntrezGene: | PRRC2C |
HGNC: | 24903 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.51e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.51e-08 | 42 |
defensive cell | 4.34e-08 | 48 |
phagocyte | 4.34e-08 | 48 |
nongranular leukocyte | 2.34e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.38e-07 | 143 |