FFCP PHASE1:Hg19::chr21:44483127..44483138,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=875 | |EntrezGene=875 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1550 | |HGNC=1550 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=219bp_to_ENST00000486098_5end | |association_with_transcript=219bp_to_ENST00000486098_5end | ||
|cluster_id=chr21:44483127..44483138,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_16_at_CBS_5end | |description=CAGE_peak_16_at_CBS_5end | ||
|id=chr21:44483127..44483138,- | |id=chr21:44483127..44483138,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000497;2.35e-10;17!CL:0002518;2.35e-10;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.46e-10,17;CL:0002518,2.46e-10,17 | |||
|ontology_enrichment_development_v019=UBERON:0003918;3.88e-36;10!UBERON:0007687;3.88e-36;10!UBERON:0003104;1.11e-12;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.67e-07!35;UBERON:0002113!2.37e-07!27;UBERON:0003918!2.37e-07!27;UBERON:0005095!2.37e-07!27;UBERON:0007687!2.37e-07!27;UBERON:0000160!5.16e-07!27;UBERON:0000059!9.15e-07!11 | |ontology_enrichment_uberon=UBERON:0005409!1.67e-07!35;UBERON:0002113!2.37e-07!27;UBERON:0003918!2.37e-07!27;UBERON:0005095!2.37e-07!27;UBERON:0007687!2.37e-07!27;UBERON:0000160!5.16e-07!27;UBERON:0000059!9.15e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.25e-15;24!UBERON:0011143;1.25e-15;24!UBERON:0000489;4.36e-13;29!UBERON:0006554;1.11e-12;30!UBERON:0001008;1.11e-12;30!UBERON:0000160;7.42e-10;17!UBERON:0002108;2.53e-09;4!UBERON:0005409;6.29e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.70e-14,26;UBERON:0003918,1.70e-14,26;UBERON:0011143,1.70e-14,26;UBERON:0005095,1.70e-14,26;UBERON:0007687,1.70e-14,26;UBERON:0000489,2.68e-12,31;UBERON:0000160,7.42e-10,17;UBERON:0002108,2.53e-09,4;UBERON:0006554,2.21e-08,47;UBERON:0001008,3.19e-08,48;UBERON:0005172,2.17e-07,54;UBERON:0005173,2.17e-07,54;UBERON:0005409,4.02e-07,25 | |||
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| ||
|short_description=p16@CBS | |short_description=p16@CBS | ||
}} | }} |
Latest revision as of 15:42, 18 September 2015
Short description: | p16@CBS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CBS_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 219bp_to_ENST00000486098_5end |
EntrezGene: | CBS |
HGNC: | 1550 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.46e-10 | 17 |
kidney epithelial cell | 2.46e-10 | 17 |
Ontology term | p-value | n |
---|---|---|
kidney | 1.70e-14 | 26 |
kidney mesenchyme | 1.70e-14 | 26 |
upper urinary tract | 1.70e-14 | 26 |
kidney rudiment | 1.70e-14 | 26 |
kidney field | 1.70e-14 | 26 |
cavitated compound organ | 2.68e-12 | 31 |
intestine | 7.42e-10 | 17 |
small intestine | 2.53e-09 | 4 |
urinary system structure | 2.21e-08 | 47 |
renal system | 3.19e-08 | 48 |
abdomen element | 2.17e-07 | 54 |
abdominal segment element | 2.17e-07 | 54 |
gastrointestinal system | 4.02e-07 | 25 |