FFCP PHASE1:Hg19::chr3:49170381..49170392,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3913 | |EntrezGene=3913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6487 | |HGNC=6487 | ||
|TSSclassifier=strong | |||
|UniProt=P55268 | |UniProt=P55268 | ||
|association_with_transcript=60bp_to_ENST00000305544_5end | |association_with_transcript=60bp_to_ENST00000305544_5end | ||
|cluster_id=chr3:49170381..49170392,- | |||
|description=CAGE_peak_3_at_LAMB2_5end | |description=CAGE_peak_3_at_LAMB2_5end | ||
|id=chr3:49170381..49170392,- | |id=chr3:49170381..49170392,- | ||
|ontology_enrichment_celltype=CL:0000055!2.22e-17!180;CL:0000057!1.55e-14!75;CL:0002620!7.53e-08!23 | |ontology_enrichment_celltype=CL:0000055!2.22e-17!180;CL:0000057!1.55e-14!75;CL:0002620!7.53e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.13e-18;23!CL:0002580;1.82e-08;3!CL:0000197;3.49e-07;6!CL:0000098;3.49e-07;6!CL:0002167;3.49e-07;6 | |ontology_enrichment_celltype_v019=CL:0002620;2.13e-18;23!CL:0002580;1.82e-08;3!CL:0000197;3.49e-07;6!CL:0000098;3.49e-07;6!CL:0002167;3.49e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,8.10e-19,23;CL:0000057,2.08e-18,76;CL:0002580,8.30e-09,3;CL:0000197,1.86e-07,6;CL:0000098,1.86e-07,6;CL:0002167,1.86e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;5.93e-13;5!DOID:450;5.93e-13;5!DOID:66;5.93e-13;5!DOID:423;5.93e-13;5!DOID:0080000;5.93e-13;5!DOID:11722;5.93e-13;5 | |ontology_enrichment_disease_v019=DOID:17;5.93e-13;5!DOID:450;5.93e-13;5!DOID:66;5.93e-13;5!DOID:423;5.93e-13;5!DOID:0080000;5.93e-13;5!DOID:11722;5.93e-13;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,8.91e-13,5;DOID:450,8.91e-13,5;DOID:66,8.91e-13,5;DOID:423,8.91e-13,5;DOID:0080000,8.91e-13,5;DOID:11722,8.91e-13,5 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.20e-09!79;UBERON:0007798!1.20e-09!79;UBERON:0000468!4.50e-08!659;UBERON:0000055!1.24e-07!69;UBERON:0001009!1.24e-07!113;UBERON:0000475!1.44e-07!365;UBERON:0003102!8.18e-07!95 | |ontology_enrichment_uberon=UBERON:0002049!1.20e-09!79;UBERON:0007798!1.20e-09!79;UBERON:0000468!4.50e-08!659;UBERON:0000055!1.24e-07!69;UBERON:0001009!1.24e-07!113;UBERON:0000475!1.44e-07!365;UBERON:0003102!8.18e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;9.20e-09;41!UBERON:0002199;1.68e-07;46!UBERON:0002416;1.68e-07;46 | |ontology_enrichment_uberon_v019=UBERON:0002097;9.20e-09;41!UBERON:0002199;1.68e-07;46!UBERON:0002416;1.68e-07;46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,6.30e-12,41;UBERON:0002199,3.46e-10,46;UBERON:0002416,3.46e-10,46;UBERON:0003102,3.11e-07,99 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.563817616383885,0,1.78784437770915,0,0,0.631719873426831,0,0,0,0.218441372130172,0.527533956456907,0.74259811776028,1.32558950291166,0.672325146451775,0.602694528023977,0,0,0.738726348460727,0.408001382488506,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.0843174571537,0.50133791063589,1.01392563272577,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.263504357079378,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0.596287222100115,0,1.04142150482278,0.56530794192401,0.838998872419812,0.275118041940067,0,0.775250277507987,0.35576626268671,2.00832367658802,0.805658634218294,0,0.976248230192678,0,0.81014194788176,0.357198913136319,0,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0,1.98788780678127,0.633152558322899,1.58891016975863,6.59724227722272,0.354668382198357,0.560677600142307,0,0.74000264525148,0.311211035399766,0.404132016209064,0.163461903113459,0.908144565869588,0,0.468642863667593,0.624320153660641,0,0.896692083310806,0,0,0.140450806702248,0.408308342509787,0.245668634623536,1.03325781175765,2.37600571456411,0.741800787835671,0.910161361938026,0.718618141816238,0.505008341862199,0.250237039743928,1.10825646193673,0,0.30648779579902,1.35214253015937,0.113432183160021,4.12596162084383,1.49490172172997,2.33125091275518,3.60109315301283,1.03052529238439,3.60696756063881,1.48893485065272,4.21940830603166,1.94874010322397,1.7670364197088,1.74894807420369,2.10139873864455,7.81021103536552,1.61203357164224,0.508681776931463,0.386521706326594,0.272746120590835,0.286804595389004,0,0,0,0.310983165046111,0.252320850875628,0,0,1.28648187638577,0,0.928735856063958,0,0.118306800039844,0.674338760312407,0,0.55146986366197,0.217879444092406,0,0.134831308160164,0,0,1.4763109092493,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0.514703430895577,0.329250856225877,0,0,0,0.651616610620649,0,0,0,0.352226082707465,0.144366447761074,0.925971025153221,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0.381988425558278,1.17217447210047,0,0.205654985406647,0.600686115687835,0.571652865261156,0.784917590417525,0,0.1466765716419,0.517086863031111,0,0.845302752556,0.531876233169741,0,0,0,0.532844358032199,0.285955987316295,1.08524321078289,0.823240336780769,0.325736184293735,0,0,0,0,0.399891964728228,0,0,0,0.958499421966331,1.14861935834114,0,1.30303176000821,0.61642896765115,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,3.74347550755453,2.85486382075459,1.89242898040722,2.45996971484698,0.300946099727719,2.27407504055985,0,0,0.184369168541703,1.12948698808508,0.391602314925481,1.02943027143257,0,0,0,0,0,0.30239029332968,1.98486246255021,3.37616341233737,2.52594084989766,1.53766979106841,1.53512174720011,0.64341568457443,0,0,0.710246901252508,0.328508624055237,0,0.232420756919918,0,0,0.0920809889358963,0.229628896329213,0.364182336013434,0.655622074797121,0,0,0,0,0,0,0.340187410553031,0.215915916102139,0,0.541892875087706,0,0.254876273045038,0,0.223874754722178,0,0,0.769350375349168,0.984043937099117,0.650756789328606,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0.290012154876366,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0.170453254832202,0.712256285173899,0,0.384380134730212,0.510450849978337,0,0,3.46293581513704,0,0.616067160352178,0.532306030317022,0,1.11194531462352,0,0.372158369359667,0.316379424718726,0.38126038784765,0.255897791311334,0.42793898803392,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0.731140468893853,1.05650146756755,0.409499734223957,0.141405431953713,0,0,0.66343897524122,0.876901770507525,0.578775534266688,0,0.202910376962704,0,0.563391205064483,0,0.0982490410131212,0.7133421029625,0.709522128141196,1.47775344708365,0.658589785919804,0.75894634753143,0.349934720244983,0,0,1.08890984861323,0.0941438007767792,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,6.73735898684351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0.121360521749513,0,0,0,0,0,0,0,0.111308705022906,0,0,0.597743964753209,0,0,0.20453736500431,0,1.55519793830904,0.0898683511473268,0.179021174675609,0,0.197286811273867,0,2.22273980289274,0,0.0927680981618513,0,0,0.524759999977174,0.724999575434793,0,0.762760950878299,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.769502585037971,0.113942055847001,0,0,0,0.31900115973192,0.641183153813036,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0.404406797884062,2.40773294189637,0,0,0,0.242780379534093,0,0,0,0.31593289814244,0.300646838828985,0,0,0,0,0,0.284609546029793,0.416024019039416,0.173559738335131,0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| ||
|short_description=p3@LAMB2 | |short_description=p3@LAMB2 | ||
}} | }} |
Latest revision as of 16:19, 18 September 2015
Short description: | p3@LAMB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LAMB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 60bp_to_ENST00000305544_5end |
EntrezGene: | LAMB2 |
HGNC: | 6487 |
UniProt: | P55268 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 8.10e-19 | 23 |
fibroblast | 2.08e-18 | 76 |
preadipocyte of the breast | 8.30e-09 | 3 |
receptor cell | 1.86e-07 | 6 |
sensory epithelial cell | 1.86e-07 | 6 |
olfactory epithelial cell | 1.86e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin of body | 6.30e-12 | 41 |
integument | 3.46e-10 | 46 |
integumental system | 3.46e-10 | 46 |
surface structure | 3.11e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.91e-13 | 5 |
myotonic disease | 8.91e-13 | 5 |
muscle tissue disease | 8.91e-13 | 5 |
myopathy | 8.91e-13 | 5 |
muscular disease | 8.91e-13 | 5 |
myotonic dystrophy | 8.91e-13 | 5 |