FFCP PHASE1:Hg19::chr17:12569199..12569216,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93649 | |EntrezGene=93649 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16067 | |HGNC=16067 | ||
|TSSclassifier=strong | |||
|UniProt=E9PEP9,Q6N065,Q8IZQ8 | |UniProt=E9PEP9,Q6N065,Q8IZQ8 | ||
|association_with_transcript=0bp_to_ENST00000395982,NM_001146312,NM_153604,uc002gnn.2,uc002gno.2_5end | |association_with_transcript=0bp_to_ENST00000395982,NM_001146312,NM_153604,uc002gnn.2,uc002gno.2_5end | ||
|cluster_id=chr17:12569199..12569216,+ | |||
|coexpression_cluster_id=C1773 | |||
|description=CAGE_peak_1_at_MYOCD_5end | |description=CAGE_peak_1_at_MYOCD_5end | ||
|id=chr17:12569199..12569216,+ | |id=chr17:12569199..12569216,+ | ||
|ontology_enrichment_celltype=CL:0000359!3.00e-13!32;CL:0000192!6.00e-12!42;CL:0000514!6.00e-12!42;CL:0000680!3.63e-08!57;CL:0000056!3.63e-08!57;CL:0000355!3.63e-08!57;CL:0000187!4.22e-08!54;CL:0000055!1.43e-07!180;CL:0000183!1.65e-07!59;CL:0002539!2.90e-07!10;CL:0000393!3.46e-07!60;CL:0000211!3.46e-07!60 | |ontology_enrichment_celltype=CL:0000359!3.00e-13!32;CL:0000192!6.00e-12!42;CL:0000514!6.00e-12!42;CL:0000680!3.63e-08!57;CL:0000056!3.63e-08!57;CL:0000355!3.63e-08!57;CL:0000187!4.22e-08!54;CL:0000055!1.43e-07!180;CL:0000183!1.65e-07!59;CL:0002539!2.90e-07!10;CL:0000393!3.46e-07!60;CL:0000211!3.46e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.31e-11;32!CL:0000192;7.03e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.72e-12,32;CL:0000192,6.37e-11,43;CL:0000514,6.37e-11,43;CL:0000187,3.20e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000514;7.03e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.51e-23!115;UBERON:0000481!8.25e-16!347;UBERON:0000468!2.67e-11!659;UBERON:0000477!3.70e-11!286;UBERON:0000914!2.44e-10!83;UBERON:0002329!2.44e-10!83;UBERON:0003077!2.44e-10!83;UBERON:0003059!2.44e-10!83;UBERON:0007282!2.44e-10!83;UBERON:0009618!2.44e-10!83;UBERON:0007285!2.44e-10!83;UBERON:0002385!7.64e-10!63;UBERON:0001015!7.64e-10!63;UBERON:0000383!7.64e-10!63;UBERON:0004872!1.01e-09!84;UBERON:0000475!1.28e-09!365;UBERON:0001135!2.11e-09!15;UBERON:0004111!4.15e-09!241;UBERON:0001134!7.97e-09!61;UBERON:0002036!7.97e-09!61;UBERON:0003082!7.97e-09!61;UBERON:0001637!2.22e-08!42;UBERON:0003509!2.22e-08!42;UBERON:0004572!2.22e-08!42;UBERON:0004573!2.71e-08!33;UBERON:0004571!2.71e-08!33;UBERON:0001981!4.75e-08!60;UBERON:0007500!4.75e-08!60;UBERON:0004537!4.75e-08!60;UBERON:0006965!4.75e-08!60;UBERON:0000467!1.00e-07!625;UBERON:0000480!1.30e-07!626;UBERON:0000025!1.40e-07!194;UBERON:0005256!1.79e-07!143;UBERON:0000922!2.04e-07!612;UBERON:0004237!2.90e-07!10;UBERON:0004695!2.90e-07!10;UBERON:0002111!2.90e-07!10;UBERON:0004178!2.90e-07!10;UBERON:0004290!3.22e-07!70;UBERON:0000119!4.15e-07!312;UBERON:0000483!4.87e-07!309;UBERON:0003104!6.41e-07!238;UBERON:0009142!6.41e-07!238;UBERON:0002050!9.67e-07!605;UBERON:0005423!9.67e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.78e-09;25!UBERON:0001135;4.29e-08;15!UBERON:0004573;6.32e-08;33!UBERON:0004571;6.32e-08;33!UBERON:0003101;3.87e-07;22!UBERON:0000079;3.87e-07;22!UBERON:0005904;8.65e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.77e-15,114;UBERON:0004872,1.07e-09,83;UBERON:0001637,2.74e-09,42;UBERON:0003509,2.74e-09,42;UBERON:0004572,2.74e-09,42;UBERON:0004573,3.81e-09,33;UBERON:0004571,3.81e-09,33;UBERON:0007500,2.00e-08,59;UBERON:0001981,2.00e-08,59;UBERON:0004537,2.00e-08,59;UBERON:0006965,2.00e-08,59;UBERON:0002385,2.25e-08,64;UBERON:0001015,2.25e-08,64;UBERON:0000383,2.25e-08,64;UBERON:0001135,3.34e-08,15;UBERON:0003104,3.34e-08,160;UBERON:0009142,3.34e-08,160;UBERON:0007100,3.81e-08,27;UBERON:0003101,3.53e-07,22;UBERON:0000079,3.53e-07,22;UBERON:0001134,4.37e-07,62;UBERON:0002036,4.37e-07,62;UBERON:0003082,4.37e-07,62;UBERON:0005156,6.28e-07,59;UBERON:0000990,6.28e-07,59;UBERON:0005904,8.68e-07,4 | |||
|phase1_expression=0.726713517082227,0,0.845726424575827,0,0.893922188854576,0.872338524100369,0,0,0,0,0.697801167972428,0,0,0.866364470720326,0.662794751455832,18.8251041006497,17.4781413126953,24.1002329827833,13.6621183661342,0,0,0,0.286235987131057,0.136874425072884,1.12988375635323,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.50590474292219,14.0374614978049,2.17269778441236,0,0.973269740605272,0.189069634328136,0,0.263504357079378,3.01251873644739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.12663051166458,0.529636723252875,0,0,2.80338800071154,11.7423895302675,3.94668077467456,0.933633106199299,0.269421344139376,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,1.10550885580591,0.103325781175765,0,1.23633464639278,0,0,0.505008341862199,0.875829639103749,0.277064115484183,2.19488810440419,2.14541457059314,2.55404700141215,0.113432183160021,2.69084453533293,1.92201649936711,0,0,0,1.03056216018252,0.558350568994769,0.337552664482532,0.389748020644795,3.02920529092937,0.644349290496095,0.969876340912871,2.4850671476163,4.43309232201617,10.6823173155607,0,0,0.286804595389004,0,0,0.464775771478074,0.518305275076852,0.252320850875628,0.72995471815166,15.6449532329816,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,5.77325368101093,0.115930404975077,1.05667824812239,0.577465791044295,0,0.951270761172991,0,0,0,0,0,0,0.335964256397719,1.27597587518148,0,0,0,0,0,0,0,0,0,0,0,5.13217338068116,0,0,0,0.224262168690721,0,0.1466765716419,5.94649892485778,0,0,0.797814349754612,1.04007436911366,0.514414748524284,0,0,0.428933980974443,1.62786481617433,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,1.67737398844108,1.14861935834114,0,0.868687840005475,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,2.82190430954022,3.00102312635806,0,22.0449113222656,5.70972764150918,3.15404830067869,0.35142424497814,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,1.99500565274481,0,0.512556597022804,0.511707249066704,0.965123526861645,0,0.308419387605311,0.355123450626254,0,0,0.116210378459959,0,0,0,0.803701137152247,1.63882051206045,5.37610101333639,0.902399225814824,0.616122696835318,0,0,0.316654886678627,0,0,0.863663664408557,0,0.541892875087706,0,0,0,0,0,0,0,0.328014645699706,0,2.06082023295445,0.732555718546747,0.41254749960294,1.14853107599234,0,6.42735719376638,0,0,0,0.275673144969061,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,1.39453664789186,1.5740617341532,0.6970372701606,0.616067160352178,3.72614221221915,0.869932992075073,10.7488047080274,12.1656153730693,0,0,0.190630193923825,0,0,0.318203247925937,21.1936132853792,1.79872457583315,0.274537029736055,0.353437207037059,1.41527737101321,0,11.7952367746915,0,0.974853958525138,8.45201174054043,4.64099698787152,5.5148118461948,0,2.75682671773062,6.6343897524122,10.5228212460903,0,0,10.7542499790233,8.36523444869325,0.563391205064483,0.573645408816206,0.687743287091848,7.133421029625,0,0,0,0,0.349934720244983,0.192444225451024,0,0,1.41215701165169,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4906390476222,0,0,0,0,0.890894042497916,0,0,0.703347082052564,1.55832187032068,0,0,42.2405735092268,5.24939439509181,0,0,0.246169610922139,16.7961377337376,0,0,0,33.9333315391052,0,0,0,0.463840490809256,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.120596438625408,0,0.442317039724898,0.591095237907095,1.75508317723178,0,0.139423744278603,20.3148682450024,0.797594390929008,0,0,0,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,6.96683351754953,12.0302287724541,9.16545217400438,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0,14.5996229054275,8.46935012340647,0,2.46427660551103,0.300646838828985,0,0,0.330991955875499,0,0,0,0,0,0,0,7.68797340264933,0,0,0,0,10.7657808302146,0,4.06765333404958,0,0,0.126621591911757,0,0,11.9533677054037,0,0,0,0,0,0,0,0,0,0,0,0,1.09524303113594,0,0,0,16.7569440763353,48.1236890424536,4.30723814746088,7.38812301846267,19.7443982142823,19.6390882548848,38.8320470973278,18.735593944205,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0.275078873194468,0,0,0,0.425246896606173,0,0.788057072991982,2.04572893726493,0,0,0,11.4351252219739,9.93137955548147,0,1.08599920350743,0.864221491201268,0.326587360109409,0,0,1.02232813071253,0,0.146552233678082,0,0.258565912723101,0.26446520348538,0.171086837884329,0,3.9511342650047,12.8907530181726,1.24271716604159,0,0,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0,1.14681839138014,1.10929051536852,0.869349641179368,0,0,0,0,0,0.468334905806882,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0.443565449968902,2.389451507455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| ||
|short_description=p1@MYOCD | |short_description=p1@MYOCD | ||
}} | }} |
Latest revision as of 16:21, 18 September 2015
Short description: | p1@MYOCD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYOCD_5end |
Coexpression cluster: | C1773_smooth_heart_sacrococcigeal_aorta_bladder_basal_rectum |
Association with transcript: | 0bp_to_ENST00000395982, NM_001146312, NM_153604, uc002gnn.2, uc002gno.2_5end |
EntrezGene: | MYOCD |
HGNC: | 16067 |
UniProt: | E9PEP9Q6N065Q8IZQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.72e-12 | 32 |
smooth muscle cell | 6.37e-11 | 43 |
smooth muscle myoblast | 6.37e-11 | 43 |
muscle cell | 3.20e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.77e-15 | 114 |
splanchnic layer of lateral plate mesoderm | 1.07e-09 | 83 |
artery | 2.74e-09 | 42 |
arterial blood vessel | 2.74e-09 | 42 |
arterial system | 2.74e-09 | 42 |
systemic artery | 3.81e-09 | 33 |
systemic arterial system | 3.81e-09 | 33 |
epithelial tube open at both ends | 2.00e-08 | 59 |
blood vessel | 2.00e-08 | 59 |
blood vasculature | 2.00e-08 | 59 |
vascular cord | 2.00e-08 | 59 |
muscle tissue | 2.25e-08 | 64 |
musculature | 2.25e-08 | 64 |
musculature of body | 2.25e-08 | 64 |
smooth muscle tissue | 3.34e-08 | 15 |
mesenchyme | 3.34e-08 | 160 |
entire embryonic mesenchyme | 3.34e-08 | 160 |
primary circulatory organ | 3.81e-08 | 27 |
male organism | 3.53e-07 | 22 |
male reproductive system | 3.53e-07 | 22 |
skeletal muscle tissue | 4.37e-07 | 62 |
striated muscle tissue | 4.37e-07 | 62 |
myotome | 4.37e-07 | 62 |
reproductive structure | 6.28e-07 | 59 |
reproductive system | 6.28e-07 | 59 |
duct of male reproductive system | 8.68e-07 | 4 |