FFCP PHASE1:Hg19::chr14:104181771..104181827,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7517 | |EntrezGene=7517 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12830 | |HGNC=12830 | ||
|TSSclassifier=strong | |||
|UniProt=O43542,G3V2P3,G3V399,G3V3Q2,G3V3C8,G3V5K0,Q53XC8 | |UniProt=O43542,G3V2P3,G3V399,G3V3Q2,G3V3C8,G3V5K0,Q53XC8 | ||
|association_with_transcript=0bp_to_ENST00000445556,ENST00000553332,ENST00000553361,ENST00000554913,ENST00000554974,ENST00000555055,ENST00000555231,ENST00000555964,ENST00000556682,ENST00000557439,NM_001100118,NM_001100119,NM_005432,uc001ynx.3,uc001yny.3,uc001ynz.3,uc001yoa.3_5end | |association_with_transcript=0bp_to_ENST00000445556,ENST00000553332,ENST00000553361,ENST00000554913,ENST00000554974,ENST00000555055,ENST00000555231,ENST00000555964,ENST00000556682,ENST00000557439,NM_001100118,NM_001100119,NM_005432,uc001ynx.3,uc001yny.3,uc001ynz.3,uc001yoa.3_5end | ||
|cluster_id=chr14:104181771..104181827,- | |||
|coexpression_cluster_id=C1713 | |||
|description=CAGE_peak_1_at_XRCC3_5end | |description=CAGE_peak_1_at_XRCC3_5end | ||
|id=chr14:104181771..104181827,- | |id=chr14:104181771..104181827,- | ||
|ontology_enrichment_celltype=CL:0000066!2.70e-16!254;CL:0000548!1.60e-07!679;CL:0000004!1.60e-07!679;CL:0000255!1.60e-07!679;CL:0000012!1.63e-07!682;CL:0000333!5.63e-07!41 | |ontology_enrichment_celltype=CL:0000066!2.70e-16!254;CL:0000548!1.60e-07!679;CL:0000004!1.60e-07!679;CL:0000255!1.60e-07!679;CL:0000012!1.63e-07!682;CL:0000333!5.63e-07!41 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.61e-16,253;CL:0000333,3.80e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.50e-30!235;DOID:14566!8.79e-30!239;DOID:0050687!2.27e-21!143;DOID:305!4.09e-15!106;DOID:2531!1.61e-12!51;DOID:0060083!1.61e-12!51;DOID:0050686!1.80e-12!137;DOID:1240!7.08e-10!39;DOID:8692!1.38e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;6.82e-08;39!DOID:2531;8.93e-08;51!DOID:0060083;8.93e-08;51!DOID:8692;3.95e-07;31!DOID:3095;5.25e-07;22!DOID:2994;5.25e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.15e-30,235;DOID:14566,7.62e-30,239;DOID:0050687,2.95e-21,143;DOID:305,3.32e-15,106;DOID:2531,1.18e-12,51;DOID:0060083,1.18e-12,51;DOID:0050686,1.59e-12,137;DOID:1240,5.58e-10,39;DOID:8692,1.16e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@XRCC3 | |short_description=p1@XRCC3 | ||
}} | }} |
Latest revision as of 16:22, 18 September 2015
Short description: | p1@XRCC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_XRCC3_5end |
Coexpression cluster: | C1713_Alveolar_Renal_Hodgkin_chronic_MCF7_Placental_Melanocyte |
Association with transcript: | 0bp_to_ENST00000445556, ENST00000553332, ENST00000553361, ENST00000554913, ENST00000554974, ENST00000555055, ENST00000555231, ENST00000555964, ENST00000556682, ENST00000557439, NM_001100118, NM_001100119, NM_005432, uc001ynx.3, uc001yny.3, uc001ynz.3, uc001yoa.3_5end |
EntrezGene: | XRCC3 |
HGNC: | 12830 |
UniProt: | O43542G3V2P3G3V399G3V3Q2G3V3C8G3V5K0Q53XC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.61e-16 | 253 |
migratory neural crest cell | 3.80e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.15e-30 | 235 |
disease of cellular proliferation | 7.62e-30 | 239 |
cell type cancer | 2.95e-21 | 143 |
carcinoma | 3.32e-15 | 106 |
hematologic cancer | 1.18e-12 | 51 |
immune system cancer | 1.18e-12 | 51 |
organ system cancer | 1.59e-12 | 137 |
leukemia | 5.58e-10 | 39 |
myeloid leukemia | 1.16e-07 | 31 |