FFCP PHASE1:Hg19::chr14:104571241..104571260,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374569 | |EntrezGene=374569 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20123 | |HGNC=20123 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000549809_5end | |association_with_transcript=-5bp_to_ENST00000549809_5end | ||
|cluster_id=chr14:104571241..104571260,+ | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_2_at_ASPG_5end | |description=CAGE_peak_2_at_ASPG_5end | ||
|id=chr14:104571241..104571260,+ | |id=chr14:104571241..104571260,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0002336!5.28e-09!1;CL:0002261!5.28e-09!1;CL:0002170!5.28e-09!1 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.84e-34;1!UBERON:0008814;1.07e-17;2!UBERON:0010056;1.07e-17;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002372;3.61e-34;1!UBERON:0001961;3.61e-34;1!UBERON:0001744;3.61e-34;1!UBERON:0001042;3.61e-34;1!UBERON:0001735;3.61e-34;1!UBERON:0000341;7.67e-18;2!UBERON:0006562;7.67e-18;2!UBERON:0003127;1.27e-17;2!UBERON:0001043;1.85e-12;3!UBERON:0001723;2.89e-12;3!UBERON:0001033;2.89e-12;3!UBERON:0000974;8.02e-07;6 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002372!1.03e-09!1;UBERON:0001961!1.03e-09!1;UBERON:0001744!1.03e-09!1;UBERON:0001735!1.03e-09!1;UBERON:0000989!1.56e-09!1;UBERON:0008811!1.56e-09!1;UBERON:0006258!1.56e-09!1;UBERON:0005876!1.56e-09!1;UBERON:0004874!1.56e-09!1;UBERON:0007029!1.69e-09!1;UBERON:0006834!2.55e-09!1;UBERON:0001043!3.26e-09!4;UBERON:0009143!3.26e-09!4;UBERON:0001042!7.78e-08!10;UBERON:0009145!7.78e-08!10;UBERON:0000974!1.13e-07!10;UBERON:0006562!3.65e-07!11;UBERON:0003729!4.43e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.61e-34;1!UBERON:0001961;3.61e-34;1!UBERON:0001744;3.61e-34;1!UBERON:0001042;3.61e-34;1!UBERON:0001735;3.61e-34;1!UBERON:0000341;7.67e-18;2!UBERON:0006562;7.67e-18;2!UBERON:0003127;1.27e-17;2!UBERON:0001043;1.85e-12;3!UBERON:0001723;2.89e-12;3!UBERON:0001033;2.89e-12;3!UBERON:0000974;8.02e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,5.05e-34,1;UBERON:0001961,5.05e-34,1;UBERON:0001744,5.05e-34,1;UBERON:0001735,5.05e-34,1;UBERON:0000341,7.67e-18,2;UBERON:0003127,1.27e-17,2;UBERON:0001042,3.71e-14,10;UBERON:0009145,3.71e-14,10;UBERON:0006562,5.76e-13,11;UBERON:0001043,1.85e-12,3;UBERON:0009143,1.85e-12,3;UBERON:0001723,2.89e-12,3;UBERON:0001033,2.89e-12,3;UBERON:0010056,2.89e-12,3;UBERON:0001557,6.36e-08,19;UBERON:0007023,1.14e-07,114;UBERON:0000072,5.10e-07,47;UBERON:0000166,5.74e-07,22 | |||
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|short_description=p2@ASPG | |short_description=p2@ASPG | ||
}} | }} |
Latest revision as of 16:48, 18 September 2015
Short description: | p2@ASPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ASPG_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -5bp_to_ENST00000549809_5end |
EntrezGene: | ASPG |
HGNC: | 20123 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 5.05e-34 | 1 |
mucosa-associated lymphoid tissue | 5.05e-34 | 1 |
lymphoid tissue | 5.05e-34 | 1 |
tonsillar ring | 5.05e-34 | 1 |
throat | 7.67e-18 | 2 |
open tracheal system trachea | 1.27e-17 | 2 |
chordate pharynx | 3.71e-14 | 10 |
pharyngeal region of foregut | 3.71e-14 | 10 |
pharynx | 5.76e-13 | 11 |
esophagus | 1.85e-12 | 3 |
esophageal region | 1.85e-12 | 3 |
tongue | 2.89e-12 | 3 |
gustatory system | 2.89e-12 | 3 |
future tongue | 2.89e-12 | 3 |
upper respiratory tract | 6.36e-08 | 19 |
adult organism | 1.14e-07 | 114 |
segment of respiratory tract | 5.10e-07 | 47 |
oral opening | 5.74e-07 | 22 |