FFCP PHASE1:Hg19::chr17:13505198..13505209,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=9955 | |EntrezGene=9955 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=5196 | |HGNC=5196 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9Y663 | |UniProt=Q9Y663 | ||
|association_with_transcript=34bp_to_ENST00000284110,NM_006042,uc002gob.1_5end | |association_with_transcript=34bp_to_ENST00000284110,NM_006042,uc002gob.1_5end | ||
|cluster_id=chr17:13505198..13505209,- | |||
|description=CAGE_peak_2_at_HS3ST3A1_5end | |description=CAGE_peak_2_at_HS3ST3A1_5end | ||
|id=chr17:13505198..13505209,- | |id=chr17:13505198..13505209,- |
Latest revision as of 16:50, 18 September 2015
Short description: | p2@HS3ST3A1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HS3ST3A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 34bp_to_ENST00000284110, NM_006042, uc002gob.1_5end |
EntrezGene: | HS3ST3A1 |
HGNC: | 5196 |
UniProt: | Q9Y663 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@HS3ST3A1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 8.47e-12 | 23 |
fibroblast | 2.28e-10 | 76 |
mesangial cell | 2.29e-10 | 2 |
kidney interstitial cell | 2.29e-10 | 2 |
juxtaglomerular complex cell | 2.29e-10 | 2 |
renal interstitial pericyte | 2.29e-10 | 2 |
extraglomerular mesangial cell | 2.29e-10 | 2 |
mesenchymal stem cell of adipose | 1.79e-09 | 8 |
preadipocyte of the breast | 2.89e-07 | 3 |
hair follicle dermal papilla cell | 3.83e-07 | 3 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
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integument | 3.20e-12 | 46 |
integumental system | 3.20e-12 | 46 |
stroma | 6.34e-11 | 4 |
abdomen connective tissue | 2.29e-10 | 2 |
abdominal segment connective tissue | 2.29e-10 | 2 |
trunk connective tissue | 2.29e-10 | 2 |
interstitial tissue | 2.29e-10 | 2 |
extraglomerular mesangium | 2.29e-10 | 2 |
kidney interstitium | 2.29e-10 | 2 |
juxtaglomerular apparatus | 2.29e-10 | 2 |
Showing 1 to 10 of 18 entries