FFCP PHASE1:Hg19::chr3:49507559..49507580,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1605 | |EntrezGene=1605 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2666 | |HGNC=2666 | ||
|TSSclassifier=strong | |||
|UniProt=Q14118,C9J6Z6,C9J196 | |UniProt=Q14118,C9J6Z6,C9J196 | ||
|association_with_transcript=0bp_to_ENST00000308775,ENST00000418588,ENST00000421560,ENST00000538711,ENST00000539901,ENST00000541308,ENST00000545947,NM_001165928,NM_001177634,NM_001177635,NM_001177636,NM_001177637,NM_001177638,NM_001177639,NM_001177640,NM_001177641,NM_001177642,NM_001177644,NM_004393,uc003cxc.3_5end | |association_with_transcript=0bp_to_ENST00000308775,ENST00000418588,ENST00000421560,ENST00000538711,ENST00000539901,ENST00000541308,ENST00000545947,NM_001165928,NM_001177634,NM_001177635,NM_001177636,NM_001177637,NM_001177638,NM_001177639,NM_001177640,NM_001177641,NM_001177642,NM_001177644,NM_004393,uc003cxc.3_5end | ||
|cluster_id=chr3:49507559..49507580,+ | |||
|description=CAGE_peak_2_at_DAG1_5end | |description=CAGE_peak_2_at_DAG1_5end | ||
|id=chr3:49507559..49507580,+ | |id=chr3:49507559..49507580,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.11e-13!254;CL:0002321!4.93e-10!248;CL:0000220!1.61e-09!246;CL:0000148!5.38e-07!10;CL:0000541!5.38e-07!10 | |ontology_enrichment_celltype=CL:0000066!1.11e-13!254;CL:0002321!4.93e-10!248;CL:0000220!1.61e-09!246;CL:0000148!5.38e-07!10;CL:0000541!5.38e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.08e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.72e-13,253;CL:0002321,1.03e-09,250;CL:0000148,4.44e-07,10;CL:0000541,4.44e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.65e-15!659;UBERON:0000481!1.67e-13!347;UBERON:0000475!5.42e-13!365;UBERON:0003104!8.53e-12!238;UBERON:0009142!8.53e-12!238;UBERON:0004119!3.13e-11!169;UBERON:0000925!3.13e-11!169;UBERON:0006595!3.13e-11!169;UBERON:0000467!5.23e-11!625;UBERON:0000480!9.35e-11!626;UBERON:0002100!1.44e-10!216;UBERON:0000062!6.80e-10!511;UBERON:0001007!9.65e-10!155;UBERON:0001555!9.65e-10!155;UBERON:0007026!9.65e-10!155;UBERON:0000477!3.80e-09!286;UBERON:0005256!1.19e-08!143;UBERON:0002417!1.29e-08!61;UBERON:0000916!1.29e-08!61;UBERON:0000064!1.42e-08!219;UBERON:0009569!2.74e-08!113;UBERON:0000077!3.43e-08!130;UBERON:0000922!4.54e-08!612;UBERON:0000119!4.65e-08!312;UBERON:0000483!6.41e-08!309;UBERON:0004111!1.88e-07!241;UBERON:0005172!2.21e-07!55;UBERON:0005173!2.21e-07!55;UBERON:0004921!2.84e-07!129;UBERON:0004185!2.84e-07!129;UBERON:0005631!3.84e-07!14;UBERON:0000158!3.84e-07!14;UBERON:0003103!4.10e-07!69;UBERON:0004923!4.14e-07!57 | |ontology_enrichment_uberon=UBERON:0000468!6.65e-15!659;UBERON:0000481!1.67e-13!347;UBERON:0000475!5.42e-13!365;UBERON:0003104!8.53e-12!238;UBERON:0009142!8.53e-12!238;UBERON:0004119!3.13e-11!169;UBERON:0000925!3.13e-11!169;UBERON:0006595!3.13e-11!169;UBERON:0000467!5.23e-11!625;UBERON:0000480!9.35e-11!626;UBERON:0002100!1.44e-10!216;UBERON:0000062!6.80e-10!511;UBERON:0001007!9.65e-10!155;UBERON:0001555!9.65e-10!155;UBERON:0007026!9.65e-10!155;UBERON:0000477!3.80e-09!286;UBERON:0005256!1.19e-08!143;UBERON:0002417!1.29e-08!61;UBERON:0000916!1.29e-08!61;UBERON:0000064!1.42e-08!219;UBERON:0009569!2.74e-08!113;UBERON:0000077!3.43e-08!130;UBERON:0000922!4.54e-08!612;UBERON:0000119!4.65e-08!312;UBERON:0000483!6.41e-08!309;UBERON:0004111!1.88e-07!241;UBERON:0005172!2.21e-07!55;UBERON:0005173!2.21e-07!55;UBERON:0004921!2.84e-07!129;UBERON:0004185!2.84e-07!129;UBERON:0005631!3.84e-07!14;UBERON:0000158!3.84e-07!14;UBERON:0003103!4.10e-07!69;UBERON:0004923!4.14e-07!57 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.40e-11,160;UBERON:0000925,4.40e-11,160;UBERON:0006595,4.40e-11,160;UBERON:0001007,9.85e-10,145;UBERON:0001555,9.85e-10,145;UBERON:0007026,9.85e-10,145;UBERON:0003104,3.72e-09,160;UBERON:0009142,3.72e-09,160;UBERON:0002100,6.41e-09,199;UBERON:0002417,6.53e-09,60;UBERON:0000916,6.53e-09,60;UBERON:0009569,6.67e-08,112;UBERON:0005172,1.20e-07,54;UBERON:0005173,1.20e-07,54;UBERON:0004923,1.64e-07,66;UBERON:0000119,1.79e-07,309;UBERON:0000483,2.45e-07,306;UBERON:0004111,3.14e-07,240;UBERON:0005631,3.15e-07,14;UBERON:0000158,3.15e-07,14;UBERON:0005256,3.68e-07,122;UBERON:0003103,3.81e-07,68;UBERON:0004921,5.36e-07,118 | |||
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| ||
|short_description=p2@DAG1 | |short_description=p2@DAG1 | ||
}} | }} |
Latest revision as of 17:01, 18 September 2015
Short description: | p2@DAG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DAG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000308775, ENST00000418588, ENST00000421560, ENST00000538711, ENST00000539901, ENST00000541308, ENST00000545947, NM_001165928, NM_001177634, NM_001177635, NM_001177636, NM_001177637, NM_001177638, NM_001177639, NM_001177640, NM_001177641, NM_001177642, NM_001177644, NM_004393, uc003cxc.3_5end |
EntrezGene: | DAG1 |
HGNC: | 2666 |
UniProt: | Q14118C9J6Z6C9J196 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.72e-13 | 253 |
embryonic cell | 1.03e-09 | 250 |
melanocyte | 4.44e-07 | 10 |
melanoblast | 4.44e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.40e-11 | 160 |
endoderm | 4.40e-11 | 160 |
presumptive endoderm | 4.40e-11 | 160 |
digestive system | 9.85e-10 | 145 |
digestive tract | 9.85e-10 | 145 |
primitive gut | 9.85e-10 | 145 |
mesenchyme | 3.72e-09 | 160 |
entire embryonic mesenchyme | 3.72e-09 | 160 |
trunk | 6.41e-09 | 199 |
abdominal segment of trunk | 6.53e-09 | 60 |
abdomen | 6.53e-09 | 60 |
subdivision of trunk | 6.67e-08 | 112 |
abdomen element | 1.20e-07 | 54 |
abdominal segment element | 1.20e-07 | 54 |
organ component layer | 1.64e-07 | 66 |
cell layer | 1.79e-07 | 309 |
epithelium | 2.45e-07 | 306 |
anatomical conduit | 3.14e-07 | 240 |
extraembryonic membrane | 3.15e-07 | 14 |
membranous layer | 3.15e-07 | 14 |
trunk mesenchyme | 3.68e-07 | 122 |
compound organ | 3.81e-07 | 68 |
subdivision of digestive tract | 5.36e-07 | 118 |