FFCP PHASE1:Hg19::chr1:173174681..173174702,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7292 | |EntrezGene=7292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11934 | |HGNC=11934 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IV74 | |UniProt=Q8IV74 | ||
|association_with_transcript=0bp_to_ENST00000367718,uc001giv.2_5end | |association_with_transcript=0bp_to_ENST00000367718,uc001giv.2_5end | ||
|cluster_id=chr1:173174681..173174702,- | |||
|coexpression_cluster_id=C725 | |||
|description=CAGE_peak_5_at_TNFSF4_5end | |description=CAGE_peak_5_at_TNFSF4_5end | ||
|id=chr1:173174681..173174702,- | |id=chr1:173174681..173174702,- | ||
|ontology_enrichment_celltype=CL:0002139!1.46e-12!24;CL:1000413!3.34e-11!9;CL:0000071!4.14e-11!18;CL:0002546!4.14e-11!18;CL:0000115!7.60e-09!35;CL:0002544!3.42e-08!6;CL:0000080!3.97e-08!6;CL:0000222!1.75e-07!119 | |ontology_enrichment_celltype=CL:0002139!1.46e-12!24;CL:1000413!3.34e-11!9;CL:0000071!4.14e-11!18;CL:0002546!4.14e-11!18;CL:0000115!7.60e-09!35;CL:0002544!3.42e-08!6;CL:0000080!3.97e-08!6;CL:0000222!1.75e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:1000413;1.30e-11;9!CL:0002544;1.95e-08;6!CL:0000071;2.77e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,7.24e-12,9;CL:0002544,1.24e-08,6;CL:0000071,1.94e-07,18;CL:0002546,1.94e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;2.77e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.82e-29!110;UBERON:0001009!8.53e-28!113;UBERON:0000178!1.42e-19!15;UBERON:0000179!1.42e-19!15;UBERON:0000463!1.42e-19!15;UBERON:0000055!9.67e-18!69;UBERON:0001981!2.20e-17!60;UBERON:0007500!2.20e-17!60;UBERON:0004537!2.20e-17!60;UBERON:0006965!2.20e-17!60;UBERON:0004872!1.73e-16!84;UBERON:0002049!2.04e-16!79;UBERON:0007798!2.04e-16!79;UBERON:0001637!3.79e-13!42;UBERON:0003509!3.79e-13!42;UBERON:0004572!3.79e-13!42;UBERON:0003915!3.34e-11!9;UBERON:0004700!3.34e-11!9;UBERON:0001917!3.34e-11!9;UBERON:0001986!4.14e-11!18;UBERON:0004638!4.14e-11!18;UBERON:0004852!4.14e-11!18;UBERON:0003914!3.90e-09!118;UBERON:0003081!2.14e-08!216;UBERON:0000487!2.47e-08!22;UBERON:0004573!1.04e-07!33;UBERON:0004571!1.04e-07!33;UBERON:0000490!2.61e-07!138;UBERON:0006914!7.27e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.86e-35;15!UBERON:0000179;4.86e-35;15!UBERON:0000463;4.86e-35;15!UBERON:0002390;3.99e-16;32!UBERON:0003915;1.30e-11;9!UBERON:0004700;1.30e-11;9!UBERON:0001917;1.30e-11;9!UBERON:0002193;8.13e-08;42!UBERON:0004638;2.77e-07;18!UBERON:0001986;2.77e-07;18!UBERON:0004852;2.77e-07;18!UBERON:0001637;5.94e-07;42!UBERON:0003509;5.94e-07;42!UBERON:0004572;5.94e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.46e-35,15;UBERON:0000179,3.46e-35,15;UBERON:0000463,3.46e-35,15;UBERON:0004535,2.48e-15,109;UBERON:0001009,9.93e-15,112;UBERON:0003915,7.24e-12,9;UBERON:0004700,7.24e-12,9;UBERON:0001917,7.24e-12,9;UBERON:0001637,9.24e-08,42;UBERON:0003509,9.24e-08,42;UBERON:0004572,9.24e-08,42;UBERON:0003081,9.77e-08,203;UBERON:0004638,1.94e-07,18;UBERON:0001986,1.94e-07,18;UBERON:0004852,1.94e-07,18 | |||
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| ||
|short_description=p5@TNFSF4 | |short_description=p5@TNFSF4 | ||
}} | }} |
Latest revision as of 17:25, 18 September 2015
Short description: | p5@TNFSF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TNFSF4_5end |
Coexpression cluster: | C725_Mast_cord_mycosis_mesenchymal_Endothelial_hepatic_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000367718, uc001giv.2_5end |
EntrezGene: | TNFSF4 |
HGNC: | 11934 |
UniProt: | Q8IV74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 7.24e-12 | 9 |
aortic endothelial cell | 1.24e-08 | 6 |
blood vessel endothelial cell | 1.94e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.94e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
blood | 3.46e-35 | 15 |
haemolymphatic fluid | 3.46e-35 | 15 |
organism substance | 3.46e-35 | 15 |
cardiovascular system | 2.48e-15 | 109 |
circulatory system | 9.93e-15 | 112 |
endothelial tube | 7.24e-12 | 9 |
arterial system endothelium | 7.24e-12 | 9 |
endothelium of artery | 7.24e-12 | 9 |
artery | 9.24e-08 | 42 |
arterial blood vessel | 9.24e-08 | 42 |
arterial system | 9.24e-08 | 42 |
lateral plate mesoderm | 9.77e-08 | 203 |
blood vessel endothelium | 1.94e-07 | 18 |
endothelium | 1.94e-07 | 18 |
cardiovascular system endothelium | 1.94e-07 | 18 |