FFCP PHASE1:Hg19::chr2:179567206..179567260,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7273 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=12403 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 17:46, 18 September 2015
| Short description: | p3@TTN |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_TTN_5end |
| Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
| Association with transcript: | 0bp_to_ENST00000414766_5end |
| EntrezGene: | TTN |
| HGNC: | 12403 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@TTN |
|---|
0
50
100
150
200
250
300
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| cardiac chamber | 4.46e-26 | 3 |
| valve | 8.07e-26 | 3 |
| cardiac mesenchyme | 8.07e-26 | 3 |
| cardial valve | 8.07e-26 | 3 |
| tunica intima | 8.07e-26 | 3 |
| heart layer | 8.07e-26 | 3 |
| endocardium | 8.07e-26 | 3 |
| endocardial cushion | 8.07e-26 | 3 |
| presumptive endocardium | 8.07e-26 | 3 |
| primary circulatory organ | 8.77e-24 | 27 |
Showing 1 to 10 of 92 entries
| Ontology term | p-value | n |
|---|---|---|
| heart disease | 2.04e-17 | 2 |
| vascular disease | 1.91e-09 | 1 |
| ischemia | 1.91e-09 | 1 |
| extrinsic cardiomyopathy | 1.91e-09 | 1 |
| myocardial ischemia | 1.91e-09 | 1 |
| myocardial infarction | 1.91e-09 | 1 |
| cardiovascular system disease | 3.58e-09 | 4 |
Showing 1 to 7 of 7 entries
