FFCP PHASE1:Hg19::chr11:61976137..61976152,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4246 | |EntrezGene=4246 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7051 | |HGNC=7051 | ||
|TSSclassifier=strong | |||
|UniProt=O75556 | |UniProt=O75556 | ||
|association_with_transcript=0bp_to_ENST00000244930,NM_002407,uc001nta.2_5end | |association_with_transcript=0bp_to_ENST00000244930,NM_002407,uc001nta.2_5end | ||
|cluster_id=chr11:61976137..61976152,+ | |||
|description=CAGE_peak_1_at_SCGB2A1_5end | |description=CAGE_peak_1_at_SCGB2A1_5end | ||
|id=chr11:61976137..61976152,+ | |id=chr11:61976137..61976152,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;2.53e-08;2!CL:0000242;2.53e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.54e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.39e-12;10!UBERON:0005564;3.39e-12;10!UBERON:0007297;5.69e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.34e-25!115;UBERON:0003135!6.81e-14!11;UBERON:0001044!8.47e-12!6;UBERON:0003293!8.47e-12!6;UBERON:0003294!8.47e-12!6;UBERON:0010047!8.47e-12!6;UBERON:0000167!8.47e-12!6;UBERON:0003408!2.61e-11!10;UBERON:0003133!3.15e-11!48;UBERON:0005156!3.57e-10!59;UBERON:0000990!3.57e-10!59;UBERON:0000062!3.78e-10!511;UBERON:0000464!5.84e-10!104;UBERON:0000077!3.14e-09!130;UBERON:0000466!8.78e-09!126;UBERON:0003101!8.95e-09!22;UBERON:0000079!8.95e-09!22;UBERON:0000473!9.68e-09!8;UBERON:0004175!1.10e-08!25;UBERON:0002553!2.23e-08!70;UBERON:0001007!4.38e-08!155;UBERON:0001555!4.38e-08!155;UBERON:0007026!4.38e-08!155;UBERON:0004921!7.10e-08!129;UBERON:0004185!7.10e-08!129;UBERON:0000078!2.33e-07!18;UBERON:0006947!3.25e-07!3;UBERON:0004054!3.25e-07!3;UBERON:0004119!3.30e-07!169;UBERON:0000925!3.30e-07!169;UBERON:0006595!3.30e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!4.34e-25!115;UBERON:0003135!6.81e-14!11;UBERON:0001044!8.47e-12!6;UBERON:0003293!8.47e-12!6;UBERON:0003294!8.47e-12!6;UBERON:0010047!8.47e-12!6;UBERON:0000167!8.47e-12!6;UBERON:0003408!2.61e-11!10;UBERON:0003133!3.15e-11!48;UBERON:0005156!3.57e-10!59;UBERON:0000990!3.57e-10!59;UBERON:0000062!3.78e-10!511;UBERON:0000464!5.84e-10!104;UBERON:0000077!3.14e-09!130;UBERON:0000466!8.78e-09!126;UBERON:0003101!8.95e-09!22;UBERON:0000079!8.95e-09!22;UBERON:0000473!9.68e-09!8;UBERON:0004175!1.10e-08!25;UBERON:0002553!2.23e-08!70;UBERON:0001007!4.38e-08!155;UBERON:0001555!4.38e-08!155;UBERON:0007026!4.38e-08!155;UBERON:0004921!7.10e-08!129;UBERON:0004185!7.10e-08!129;UBERON:0000078!2.33e-07!18;UBERON:0006947!3.25e-07!3;UBERON:0004054!3.25e-07!3;UBERON:0004119!3.30e-07!169;UBERON:0000925!3.30e-07!169;UBERON:0006595!3.30e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.94e-19;11!UBERON:0006947;1.90e-11;3!UBERON:0004054;1.90e-11;3!UBERON:0003101;3.74e-11;22!UBERON:0000079;3.74e-11;22!UBERON:0000473;1.08e-10;8!UBERON:0003133;2.32e-10;44!UBERON:0001044;7.36e-10;6!UBERON:0003293;7.36e-10;6!UBERON:0003294;7.36e-10;6!UBERON:0010047;7.36e-10;6!UBERON:0003408;7.36e-10;6!UBERON:0000167;7.36e-10;6!UBERON:0004175;1.73e-09;21!UBERON:0005904;1.11e-08;4!UBERON:0001829;2.36e-08;2!UBERON:0003127;3.74e-08;2!UBERON:0000341;5.04e-08;2!UBERON:0002553;2.96e-07;52!UBERON:0000991;3.69e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,3.25e-19,11;UBERON:0003133,9.24e-13,48;UBERON:0007023,1.97e-12,114;UBERON:0006947,1.78e-11,3;UBERON:0004054,1.78e-11,3;UBERON:0005156,3.49e-11,59;UBERON:0000990,3.49e-11,59;UBERON:0003101,3.51e-11,22;UBERON:0000079,3.51e-11,22;UBERON:0000473,1.10e-10,8;UBERON:0002553,1.19e-10,61;UBERON:0001044,7.88e-10,6;UBERON:0003293,7.88e-10,6;UBERON:0003294,7.88e-10,6;UBERON:0010047,7.88e-10,6;UBERON:0000167,7.88e-10,6;UBERON:0005904,1.05e-08,4;UBERON:0003408,1.63e-08,10;UBERON:0001829,2.36e-08,2;UBERON:0003127,3.88e-08,2;UBERON:0000341,4.62e-08,2;UBERON:0004175,9.65e-08,25;UBERON:0000991,3.80e-07,21;UBERON:0009196,3.80e-07,21;UBERON:0009117,3.80e-07,21;UBERON:0005564,3.80e-07,21;UBERON:0004176,8.93e-07,22;UBERON:0001004,9.05e-07,74;UBERON:0000166,9.19e-07,22 | |||
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| ||
|short_description=p1@SCGB2A1 | |short_description=p1@SCGB2A1 | ||
}} | }} |
Latest revision as of 18:36, 18 September 2015
Short description: | p1@SCGB2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCGB2A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000244930, NM_002407, uc001nta.2_5end |
EntrezGene: | SCGB2A1 |
HGNC: | 7051 |
UniProt: | O75556 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.54e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 3.25e-19 | 11 |
reproductive organ | 9.24e-13 | 48 |
adult organism | 1.97e-12 | 114 |
male genital duct | 1.78e-11 | 3 |
internal male genitalia | 1.78e-11 | 3 |
reproductive structure | 3.49e-11 | 59 |
reproductive system | 3.49e-11 | 59 |
male organism | 3.51e-11 | 22 |
male reproductive system | 3.51e-11 | 22 |
testis | 1.10e-10 | 8 |
anatomical cavity | 1.19e-10 | 61 |
saliva-secreting gland | 7.88e-10 | 6 |
gland of oral region | 7.88e-10 | 6 |
gland of foregut | 7.88e-10 | 6 |
oral gland | 7.88e-10 | 6 |
oral cavity | 7.88e-10 | 6 |
duct of male reproductive system | 1.05e-08 | 4 |
gland of gut | 1.63e-08 | 10 |
major salivary gland | 2.36e-08 | 2 |
open tracheal system trachea | 3.88e-08 | 2 |
throat | 4.62e-08 | 2 |
internal genitalia | 9.65e-08 | 25 |
gonad | 3.80e-07 | 21 |
indifferent external genitalia | 3.80e-07 | 21 |
indifferent gonad | 3.80e-07 | 21 |
gonad primordium | 3.80e-07 | 21 |
external genitalia | 8.93e-07 | 22 |
respiratory system | 9.05e-07 | 74 |
oral opening | 9.19e-07 | 22 |