FFCP PHASE1:Hg19::chr7:45928188..45928195,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:45928188..45928195,+
|short_description=p6@IGFBP1
|description=CAGE_peak_6_at_IGFBP1_5end
|association_with_transcript=92bp_to_ENST00000468955_5end
|Entre...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3484 | |EntrezGene=3484 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5469 | |HGNC=5469 | ||
|TSSclassifier=strong | |||
|UniProt=C9J6H2 | |UniProt=C9J6H2 | ||
|association_with_transcript=92bp_to_ENST00000468955_5end | |||
|cluster_id=chr7:45928188..45928195,+ | |||
|coexpression_cluster_id=C1998 | |||
|description=CAGE_peak_6_at_IGFBP1_5end | |||
|id=chr7:45928188..45928195,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.19e-10!12;CL:0000417!4.19e-10!12;CL:0000668!4.19e-10!12;CL:0000414!4.19e-10!12;CL:0000412!4.19e-10!12;CL:0000182!4.19e-10!12;CL:0000153!2.67e-09!9;CL:0000447!2.67e-09!9;CL:0000327!8.13e-09!14;CL:0000667!2.55e-08!6;CL:0000058!2.55e-08!6;CL:0000138!2.55e-08!6;CL:0002541!4.06e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.53e-09;3!CL:0000083;1.40e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.41e-09,3;CL:0000083,1.40e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.58e-26;1!UBERON:0004161;4.83e-10;11!UBERON:0009497;1.22e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;7.30e-14;2!DOID:1793;1.40e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,7.30e-14,2;DOID:1793,1.40e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002107!3.30e-12!19;UBERON:0006925!3.30e-12!19;UBERON:0008836!3.30e-12!19;UBERON:0008835!2.04e-10!22;UBERON:0003894!2.04e-10!22;UBERON:0009854!6.33e-10!23;UBERON:0007499!4.67e-09!25;UBERON:0009497!4.67e-09!25;UBERON:0000015!4.67e-09!25;UBERON:0002423!4.67e-09!25;UBERON:0006235!4.67e-09!25;UBERON:0004161!4.67e-09!25;UBERON:0005057!1.13e-08!26;UBERON:0009856!1.13e-08!26;UBERON:0000476!4.06e-08!3;UBERON:0000920!4.06e-08!3;UBERON:0003124!1.77e-07!7;UBERON:0002365!3.97e-07!31;UBERON:0002330!3.97e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.91e-12;19!UBERON:0006925;1.91e-12;19!UBERON:0000478;5.74e-10;24!UBERON:0002423;1.28e-09;25!UBERON:0003124;1.53e-09;3!UBERON:0000920;1.53e-09;3!UBERON:0000949;7.69e-08;43!UBERON:0002365;9.97e-08;31!UBERON:0002330;9.97e-08;31!UBERON:0001987;1.49e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,3.53e-15,7;UBERON:0002107,1.77e-12,19;UBERON:0006925,1.77e-12,19;UBERON:0008836,1.77e-12,19;UBERON:0008835,7.16e-11,22;UBERON:0003894,7.16e-11,22;UBERON:0009854,1.99e-10,23;UBERON:0000478,5.74e-10,24;UBERON:0007499,1.20e-09,25;UBERON:0009497,1.20e-09,25;UBERON:0000015,1.20e-09,25;UBERON:0002423,1.20e-09,25;UBERON:0006235,1.20e-09,25;UBERON:0004161,1.20e-09,25;UBERON:0000920,1.41e-09,3;UBERON:0000949,2.65e-09,45;UBERON:0009856,2.67e-09,26;UBERON:0005631,4.49e-08,14;UBERON:0000158,4.49e-08,14;UBERON:0002365,6.69e-08,31;UBERON:0002330,6.69e-08,31;UBERON:0001987,1.49e-07,4;UBERON:0004340,1.49e-07,4;UBERON:0002368,4.58e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0.579606171470105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31897010310274,13.2506888912221,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10458295569236,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.92846333903473,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0.579606171470105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31897010310274,13.2506888912221,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10458295569236,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.92846333903473,0,0,0,0,0,0 | ||
|short_description=p6@IGFBP1 | |||
}} | }} |
Latest revision as of 19:11, 18 September 2015
Short description: | p6@IGFBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IGFBP1_5end |
Coexpression cluster: | C1998_liver_chorionic_placenta_tubular_Hepatocyte_lung_hepatocellular |
Association with transcript: | 92bp_to_ENST00000468955_5end |
EntrezGene: | IGFBP1 |
HGNC: | 5469 |
UniProt: | C9J6H2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.41e-09 | 3 |
epithelial cell of pancreas | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chorion | 3.53e-15 | 7 |
liver | 1.77e-12 | 19 |
digestive gland | 1.77e-12 | 19 |
liver bud | 1.77e-12 | 19 |
hepatic diverticulum | 7.16e-11 | 22 |
liver primordium | 7.16e-11 | 22 |
digestive tract diverticulum | 1.99e-10 | 23 |
extraembryonic structure | 5.74e-10 | 24 |
epithelial sac | 1.20e-09 | 25 |
epithelium of foregut-midgut junction | 1.20e-09 | 25 |
anatomical boundary | 1.20e-09 | 25 |
hepatobiliary system | 1.20e-09 | 25 |
foregut-midgut junction | 1.20e-09 | 25 |
septum transversum | 1.20e-09 | 25 |
egg chorion | 1.41e-09 | 3 |
endocrine system | 2.65e-09 | 45 |
sac | 2.67e-09 | 26 |
extraembryonic membrane | 4.49e-08 | 14 |
membranous layer | 4.49e-08 | 14 |
exocrine gland | 6.69e-08 | 31 |
exocrine system | 6.69e-08 | 31 |
placenta | 1.49e-07 | 4 |
allantois | 1.49e-07 | 4 |
endocrine gland | 4.58e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 7.30e-14 | 2 |
pancreatic cancer | 1.40e-07 | 4 |