FFCP PHASE1:Hg19::chr1:6260935..6260943,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6146 | |EntrezGene=6146 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10315 | |HGNC=10315 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-33bp_to_ENST00000497965_5end | |association_with_transcript=-33bp_to_ENST00000497965_5end | ||
|cluster_id=chr1:6260935..6260943,- | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_14_at_RPL22_5end | |description=CAGE_peak_14_at_RPL22_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!1.50e-24!5;CL:0000039!7.61e-12!7;CL:0000586!7.61e-12!7;CL:0000540!4.58e-08!6;CL:0000031!4.58e-08!6;CL:0000404!4.58e-08!6;CL:0000817!6.09e-07!3 | |ontology_enrichment_celltype=CL:0002322!1.50e-24!5;CL:0000039!7.61e-12!7;CL:0000586!7.61e-12!7;CL:0000540!4.58e-08!6;CL:0000031!4.58e-08!6;CL:0000404!4.58e-08!6;CL:0000817!6.09e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.83e-41;7!CL:0000586;1.83e-41;7!CL:0000540;1.61e-27;6!CL:0000404;1.61e-27;6!CL:0002322;2.33e-15;5!CL:0000148;3.76e-08;10 | |ontology_enrichment_celltype_v019=CL:0000039;1.83e-41;7!CL:0000586;1.83e-41;7!CL:0000540;1.61e-27;6!CL:0000404;1.61e-27;6!CL:0002322;2.33e-15;5!CL:0000148;3.76e-08;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.21e-41,7;CL:0000586,1.21e-41,7;CL:0000540,2.32e-27,6;CL:0000031,2.32e-27,6;CL:0000404,2.32e-27,6;CL:0000047,1.02e-20,8;CL:0002322,2.34e-15,5;CL:0000148,3.76e-08,10;CL:0000541,3.76e-08,10;CL:0000133,2.03e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.40e-29;10!UBERON:0005564;3.40e-29;10!CL:0000031;1.61e-27;6 | |ontology_enrichment_development_v019=UBERON:0009117;3.40e-29;10!UBERON:0005564;3.40e-29;10!CL:0000031;1.61e-27;6 | ||
|ontology_enrichment_disease=DOID:2531!6.94e-20!51;DOID:0060083!6.94e-20!51;DOID:1240!1.52e-17!39;DOID:8692!4.97e-16!31;DOID:3095!3.84e-10!22;DOID:2994!3.84e-10!22;DOID:0050686!5.15e-07!137;DOID:162!7.03e-07!235 | |ontology_enrichment_disease=DOID:2531!6.94e-20!51;DOID:0060083!6.94e-20!51;DOID:1240!1.52e-17!39;DOID:8692!4.97e-16!31;DOID:3095!3.84e-10!22;DOID:2994!3.84e-10!22;DOID:0050686!5.15e-07!137;DOID:162!7.03e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.64e-13;22!DOID:2994;1.64e-13;22 | |ontology_enrichment_disease_v019=DOID:3095;1.64e-13;22!DOID:2994;1.64e-13;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.44e-13,22;DOID:2994,1.44e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.28e-10!8;UBERON:0003135!1.53e-07!11;UBERON:0004176!1.88e-07!22 | |ontology_enrichment_uberon=UBERON:0000473!2.28e-10!8;UBERON:0003135!1.53e-07!11;UBERON:0004176!1.88e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.35e-36;8!UBERON:0003135;1.37e-26;11!UBERON:0000991;3.88e-14;21!UBERON:0003101;1.64e-13;22!UBERON:0000079;1.64e-13;22!UBERON:0000922;1.21e-08;49 | |ontology_enrichment_uberon_v019=UBERON:0000473;2.35e-36;8!UBERON:0003135;1.37e-26;11!UBERON:0000991;3.88e-14;21!UBERON:0003101;1.64e-13;22!UBERON:0000079;1.64e-13;22!UBERON:0000922;1.21e-08;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.64e-36,8;UBERON:0003135,1.06e-26,11;UBERON:0000991,3.39e-14,21;UBERON:0009196,3.39e-14,21;UBERON:0009117,3.39e-14,21;UBERON:0005564,3.39e-14,21;UBERON:0004176,1.44e-13,22;UBERON:0003101,1.44e-13,22;UBERON:0000079,1.44e-13,22 | |||
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|short_description=p14@RPL22 | |short_description=p14@RPL22 | ||
}} | }} |
Latest revision as of 19:23, 18 September 2015
Short description: | p14@RPL22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_RPL22_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -33bp_to_ENST00000497965_5end |
EntrezGene: | RPL22 |
HGNC: | 10315 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.21e-41 | 7 |
germ cell | 1.21e-41 | 7 |
neuron | 2.32e-27 | 6 |
neuroblast | 2.32e-27 | 6 |
electrically signaling cell | 2.32e-27 | 6 |
neuronal stem cell | 1.02e-20 | 8 |
embryonic stem cell | 2.34e-15 | 5 |
melanocyte | 3.76e-08 | 10 |
melanoblast | 3.76e-08 | 10 |
neurectodermal cell | 2.03e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 1.64e-36 | 8 |
male reproductive organ | 1.06e-26 | 11 |
gonad | 3.39e-14 | 21 |
indifferent external genitalia | 3.39e-14 | 21 |
indifferent gonad | 3.39e-14 | 21 |
gonad primordium | 3.39e-14 | 21 |
external genitalia | 1.44e-13 | 22 |
male organism | 1.44e-13 | 22 |
male reproductive system | 1.44e-13 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.44e-13 | 22 |
germ cell cancer | 1.44e-13 | 22 |