FFCP PHASE1:Hg19::chr3:50329835..50329873,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7866 | |EntrezGene=7866 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5457 | |HGNC=5457 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000462001,ENST00000474556,ENST00000489569_5end | |association_with_transcript=0bp_to_ENST00000462001,ENST00000474556,ENST00000489569_5end | ||
|cluster_id=chr3:50329835..50329873,- | |||
|description=CAGE_peak_1_at_IFRD2_5end | |description=CAGE_peak_1_at_IFRD2_5end | ||
|id=chr3:50329835..50329873,- | |id=chr3:50329835..50329873,- | ||
|ontology_enrichment_celltype=CL:0002321!4.53e-20!248;CL:0000220!4.96e-20!246;CL:0000066!1.92e-19!254;CL:0000548!1.99e-15!679;CL:0000004!1.99e-15!679;CL:0000255!1.99e-15!679;CL:0000012!2.90e-15!682;CL:0000222!1.24e-12!119;CL:0000144!2.10e-10!625;CL:0000055!2.46e-09!180;CL:0002371!3.22e-09!591;CL:0000071!8.75e-09!18;CL:0002546!8.75e-09!18;CL:0002078!1.74e-08!44;CL:0000115!4.15e-08!35;CL:0002139!5.16e-08!24;CL:0000003!1.19e-07!722;CL:0000213!1.96e-07!57;CL:0000215!1.96e-07!57;CL:0000063!2.06e-07!578;CL:0000076!3.63e-07!62 | |ontology_enrichment_celltype=CL:0002321!4.53e-20!248;CL:0000220!4.96e-20!246;CL:0000066!1.92e-19!254;CL:0000548!1.99e-15!679;CL:0000004!1.99e-15!679;CL:0000255!1.99e-15!679;CL:0000012!2.90e-15!682;CL:0000222!1.24e-12!119;CL:0000144!2.10e-10!625;CL:0000055!2.46e-09!180;CL:0002371!3.22e-09!591;CL:0000071!8.75e-09!18;CL:0002546!8.75e-09!18;CL:0002078!1.74e-08!44;CL:0000115!4.15e-08!35;CL:0002139!5.16e-08!24;CL:0000003!1.19e-07!722;CL:0000213!1.96e-07!57;CL:0000215!1.96e-07!57;CL:0000063!2.06e-07!578;CL:0000076!3.63e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0000071;8.07e-09;18!CL:0002139;4.36e-08;24!CL:0000115;2.27e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.59e-20,250;CL:0000066,1.39e-19,253;CL:0000222,8.12e-13,121;CL:0002078,6.84e-09,45;CL:0000071,8.75e-09,18;CL:0002546,8.75e-09,18;CL:0000115,1.57e-08,36;CL:0002139,5.16e-08,24;CL:0000213,8.59e-08,58;CL:0000215,8.59e-08,58;CL:0000076,9.27e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;8.07e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!3.78e-16!238;UBERON:0009142!3.78e-16!238;UBERON:0003914!1.06e-15!118;UBERON:0000490!3.16e-14!138;UBERON:0000055!3.22e-12!69;UBERON:0005256!9.94e-12!143;UBERON:0002100!1.14e-11!216;UBERON:0001981!1.39e-11!60;UBERON:0007500!1.39e-11!60;UBERON:0004537!1.39e-11!60;UBERON:0006965!1.39e-11!60;UBERON:0002049!2.21e-11!79;UBERON:0007798!2.21e-11!79;UBERON:0004872!1.11e-10!84;UBERON:0000486!7.84e-10!82;UBERON:0006914!1.55e-09!25;UBERON:0004119!1.70e-09!169;UBERON:0000925!1.70e-09!169;UBERON:0006595!1.70e-09!169;UBERON:0000487!2.75e-09!22;UBERON:0001637!3.90e-09!42;UBERON:0003509!3.90e-09!42;UBERON:0004572!3.90e-09!42;UBERON:0001986!8.75e-09!18;UBERON:0004638!8.75e-09!18;UBERON:0004852!8.75e-09!18;UBERON:0004290!4.41e-08!70;UBERON:0000077!2.14e-07!130;UBERON:0001007!3.19e-07!155;UBERON:0001555!3.19e-07!155;UBERON:0007026!3.19e-07!155;UBERON:0001048!3.20e-07!168;UBERON:0000119!3.21e-07!312;UBERON:0001009!3.30e-07!113;UBERON:0000914!3.63e-07!83;UBERON:0002329!3.63e-07!83;UBERON:0003077!3.63e-07!83;UBERON:0003059!3.63e-07!83;UBERON:0007282!3.63e-07!83;UBERON:0009618!3.63e-07!83;UBERON:0007285!3.63e-07!83;UBERON:0000483!4.90e-07!309;UBERON:0003102!6.31e-07!95;UBERON:0000481!6.96e-07!347;UBERON:0004535!7.97e-07!110 | |ontology_enrichment_uberon=UBERON:0003104!3.78e-16!238;UBERON:0009142!3.78e-16!238;UBERON:0003914!1.06e-15!118;UBERON:0000490!3.16e-14!138;UBERON:0000055!3.22e-12!69;UBERON:0005256!9.94e-12!143;UBERON:0002100!1.14e-11!216;UBERON:0001981!1.39e-11!60;UBERON:0007500!1.39e-11!60;UBERON:0004537!1.39e-11!60;UBERON:0006965!1.39e-11!60;UBERON:0002049!2.21e-11!79;UBERON:0007798!2.21e-11!79;UBERON:0004872!1.11e-10!84;UBERON:0000486!7.84e-10!82;UBERON:0006914!1.55e-09!25;UBERON:0004119!1.70e-09!169;UBERON:0000925!1.70e-09!169;UBERON:0006595!1.70e-09!169;UBERON:0000487!2.75e-09!22;UBERON:0001637!3.90e-09!42;UBERON:0003509!3.90e-09!42;UBERON:0004572!3.90e-09!42;UBERON:0001986!8.75e-09!18;UBERON:0004638!8.75e-09!18;UBERON:0004852!8.75e-09!18;UBERON:0004290!4.41e-08!70;UBERON:0000077!2.14e-07!130;UBERON:0001007!3.19e-07!155;UBERON:0001555!3.19e-07!155;UBERON:0007026!3.19e-07!155;UBERON:0001048!3.20e-07!168;UBERON:0000119!3.21e-07!312;UBERON:0001009!3.30e-07!113;UBERON:0000914!3.63e-07!83;UBERON:0002329!3.63e-07!83;UBERON:0003077!3.63e-07!83;UBERON:0003059!3.63e-07!83;UBERON:0007282!3.63e-07!83;UBERON:0009618!3.63e-07!83;UBERON:0007285!3.63e-07!83;UBERON:0000483!4.90e-07!309;UBERON:0003102!6.31e-07!95;UBERON:0000481!6.96e-07!347;UBERON:0004535!7.97e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0006914;1.44e-09;25!UBERON:0000487;2.54e-09;22!UBERON:0004638;8.07e-09;18!UBERON:0001986;8.07e-09;18!UBERON:0004852;8.07e-09;18!UBERON:0000490;2.39e-08;33!UBERON:0003914;3.95e-08;74!UBERON:0007500;2.47e-07;56!UBERON:0001981;2.47e-07;56!UBERON:0004537;2.47e-07;56!UBERON:0001637;6.27e-07;42!UBERON:0003509;6.27e-07;42!UBERON:0004572;6.27e-07;42 | |||
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| ||
|short_description=p1@IFRD2 | |short_description=p1@IFRD2 | ||
}} | }} |
Latest revision as of 19:32, 18 September 2015
Short description: | p1@IFRD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IFRD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000462001, ENST00000474556, ENST00000489569_5end |
EntrezGene: | IFRD2 |
HGNC: | 5457 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.59e-20 | 250 |
epithelial cell | 1.39e-19 | 253 |
mesodermal cell | 8.12e-13 | 121 |
meso-epithelial cell | 6.84e-09 | 45 |
blood vessel endothelial cell | 8.75e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.75e-09 | 18 |
endothelial cell | 1.57e-08 | 36 |
endothelial cell of vascular tree | 5.16e-08 | 24 |
lining cell | 8.59e-08 | 58 |
barrier cell | 8.59e-08 | 58 |
squamous epithelial cell | 9.27e-07 | 63 |