FFCP PHASE1:Hg19::chr2:8819174..8819185,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:8819174..8819185,+
|short_description=p8@ID2
|description=CAGE_peak_8_at_ID2_5end
|association_with_transcript=-154bp_to_uc010yiu.1_5end
|EntrezGene=3398
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3398 | |EntrezGene=3398 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5361 | |HGNC=5361 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-154bp_to_uc010yiu.1_5end | |||
|cluster_id=chr2:8819174..8819185,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_8_at_ID2_5end | |||
|id=chr2:8819174..8819185,+ | |||
|ontology_enrichment_celltype=CL:0000080!1.32e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002393;6.90e-26;6!CL:0002397;6.90e-26;6!CL:0000767;4.60e-23;3!CL:0000094;3.19e-19;8!CL:0000511;9.48e-18;1!CL:0002625;9.48e-18;1!CL:0000216;9.48e-18;1!CL:0002591;9.48e-18;1!CL:0000081;3.61e-14;11!CL:0000771;1.51e-09;2!CL:0000766;7.32e-08;69!CL:0000226;8.86e-07;3!CL:0002567;8.86e-07;3!CL:0000842;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,5.76e-23,3;CL:0000094,3.73e-19,8;CL:0000511,6.23e-18,1;CL:0002625,6.23e-18,1;CL:0000216,6.23e-18,1;CL:0002591,1.70e-17,1;CL:0002393,1.72e-17,9;CL:0002397,1.72e-17,9;CL:0000081,4.04e-14,11;CL:0000766,5.14e-14,72;CL:0000860,5.30e-10,42;CL:0002057,5.30e-10,42;CL:0000771,1.57e-09,2;CL:0000763,3.42e-09,108;CL:0000049,3.42e-09,108;CL:0000738,4.25e-09,136;CL:0000473,9.42e-09,48;CL:0000234,9.42e-09,48;CL:0000037,3.20e-07,168;CL:0002194,5.37e-07,59;CL:0000576,5.37e-07,59;CL:0000040,5.37e-07,59;CL:0000559,5.37e-07,59;CL:0002567,7.28e-07,3;CL:0000988,8.19e-07,177;CL:0002009,9.06e-07,61;CL:0000226,9.64e-07,3;CL:0000842,9.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.30e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;9.48e-18;1!UBERON:0001343;9.48e-18;1!UBERON:0004910;9.48e-18;1!UBERON:0004813;9.48e-18;1!UBERON:0000078;1.51e-09;2!UBERON:0004909;1.51e-09;2!UBERON:0002012;1.51e-09;2!UBERON:0008886;1.51e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.23e-18,1;UBERON:0001343,6.23e-18,1;UBERON:0004910,6.23e-18,1;UBERON:0005154,6.23e-18,1;UBERON:0005295,6.23e-18,1;UBERON:0004813,6.23e-18,1;UBERON:0005297,6.23e-18,1;UBERON:0005294,6.23e-18,1;UBERON:0010141,6.23e-18,1;UBERON:0005891,6.23e-18,1;UBERON:0004909,1.22e-09,2;UBERON:0000078,2.02e-09,2;UBERON:0007497,2.02e-09,2;UBERON:0003643,2.02e-09,2;UBERON:0003504,2.02e-09,2;UBERON:0003469,2.02e-09,2;UBERON:0003496,2.02e-09,2;UBERON:0002012,2.02e-09,2;UBERON:0008886,2.02e-09,2;UBERON:0007303,2.02e-09,2;UBERON:0002061,2.02e-09,2;UBERON:0005432,2.02e-09,2;UBERON:0004363,2.02e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.15148819429164,2.47705797305722,0,0,0,0,0,0,2.21598163412751,4.21143339687298,3.90619567288533,0,0,0,0,1.51150377475524,0,0,0,0,0,0,0,1.37898272294647,0,0,0.564727018627814,0,0,0.306083892370903,0.641858054152187,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0.637812899895131,0,0.22465726229299,0.600707571366025,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802320587350522,0.144824403882799,0,0,0,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0.482022059766964,0.330881918197182,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.513372145118994,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,1.2942852049117,0.426910231213777,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0,0.457847324091717,0.082509499920588,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.500547425135725,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0.251932747854276,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0.593042257361244,0.370691816839509,0.313265848516366,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0.330991955875499,0.313932918407225,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0.387025325156341,0.438535902517113,0.0821154570532092,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0.202210631562555,0,0,0,0,0.160753148465019,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0.276697269872462,0,0,0,0,0,0.28984205722165,0,0,0,0.378806010550178,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0.438568099157414,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0.54604819096007,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0.235939446695481,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0.535701835878287,0,0,0.227662191351298,0,0,0.171488009437418,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0,0,0.214429632529969,0.158013611732727,0,0,0,0,0,0,0,0.118332000730565,0,0.846774100381858,0,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0.467878926924211,0.397901550322736,0,0.11294608203896,0.109940516745429,0.301925687133347,0.154348316215889,0.218559560503957,0,0,0.471353094203252,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0.357107877211315,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.886889507080059,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p8@ID2 | |||
}} | }} |
Latest revision as of 20:21, 18 September 2015
Short description: | p8@ID2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ID2_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -154bp_to_uc010yiu.1_5end |
EntrezGene: | ID2 |
HGNC: | 5361 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 5.76e-23 | 3 |
granulocyte | 3.73e-19 | 8 |
androgen binding protein secreting cell | 6.23e-18 | 1 |
seminiferous tubule epithelial cell | 6.23e-18 | 1 |
Sertoli cell | 6.23e-18 | 1 |
smooth muscle cell of the pulmonary artery | 1.70e-17 | 1 |
intermediate monocyte | 1.72e-17 | 9 |
CD14-positive, CD16-positive monocyte | 1.72e-17 | 9 |
blood cell | 4.04e-14 | 11 |
myeloid leukocyte | 5.14e-14 | 72 |
classical monocyte | 5.30e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.30e-10 | 42 |
eosinophil | 1.57e-09 | 2 |
myeloid cell | 3.42e-09 | 108 |
common myeloid progenitor | 3.42e-09 | 108 |
leukocyte | 4.25e-09 | 136 |
defensive cell | 9.42e-09 | 48 |
phagocyte | 9.42e-09 | 48 |
hematopoietic stem cell | 3.20e-07 | 168 |
monopoietic cell | 5.37e-07 | 59 |
monocyte | 5.37e-07 | 59 |
monoblast | 5.37e-07 | 59 |
promonocyte | 5.37e-07 | 59 |
light melanocyte | 7.28e-07 | 3 |
hematopoietic cell | 8.19e-07 | 177 |
macrophage dendritic cell progenitor | 9.06e-07 | 61 |
single nucleate cell | 9.64e-07 | 3 |
mononuclear cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 6.23e-18 | 1 |
seminiferous tubule of testis | 6.23e-18 | 1 |
epithelium of male gonad | 6.23e-18 | 1 |
epithelial cord | 6.23e-18 | 1 |
sex cord | 6.23e-18 | 1 |
seminiferous tubule epithelium | 6.23e-18 | 1 |
testis sex cord | 6.23e-18 | 1 |
genital ridge | 6.23e-18 | 1 |
primitive sex cord of indifferent gonad | 6.23e-18 | 1 |
coelomic epithelium | 6.23e-18 | 1 |
epithelium of gonad | 1.22e-09 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.02e-09 | 2 |
developing epithelial placode | 2.02e-09 | 2 |
respiratory system arterial blood vessel | 2.02e-09 | 2 |
respiratory system blood vessel | 2.02e-09 | 2 |
respiratory system artery | 2.02e-09 | 2 |
head blood vessel | 2.02e-09 | 2 |
pulmonary artery | 2.02e-09 | 2 |
pulmonary vascular system | 2.02e-09 | 2 |
pharyngeal vasculature | 2.02e-09 | 2 |
truncus arteriosus | 2.02e-09 | 2 |
aortic sac | 2.02e-09 | 2 |
pharyngeal arch artery | 2.02e-09 | 2 |