FFCP PHASE1:Hg19::chr14:106328169..106328244,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:106328169..106328244,-
|short_description=p1@IGHM
|description=CAGE_peak_1_at_IGHM_5end
|association_with_transcript=-1bp_to_X58529_5end
|EntrezGene=3507...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3507 | |EntrezGene=3507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5541 | |HGNC=5541 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_X58529_5end | |||
|cluster_id=chr14:106328169..106328244,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_IGHM_5end | |||
|id=chr14:106328169..106328244,- | |||
|ontology_enrichment_celltype=CL:0000945!8.40e-33!24;CL:0000826!8.40e-33!24;CL:0002087!1.70e-30!119;CL:0000738!1.84e-30!140;CL:0000542!2.37e-30!53;CL:0000051!2.37e-30!53;CL:0000838!3.73e-29!52;CL:0000037!4.22e-28!172;CL:0000566!4.22e-28!172;CL:0000988!3.89e-25!182;CL:0002031!1.70e-23!124;CL:0002032!6.13e-23!165;CL:0000837!6.13e-23!165;CL:0000236!2.82e-20!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.84e-49;24!CL:0000236;3.58e-28;13!CL:0000542;1.69e-18;53!CL:0002087;1.65e-07;104!CL:0000784;3.48e-07;3!CL:0000226;9.20e-07;3!CL:0000842;9.20e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.86e-49,24;CL:0000826,2.86e-49,24;CL:0000236,4.23e-30,14;CL:0000542,7.74e-29,53;CL:0000051,7.74e-29,53;CL:0000838,2.86e-27,52;CL:0000037,1.72e-22,168;CL:0000738,2.17e-22,136;CL:0002087,8.17e-21,115;CL:0000988,1.46e-20,177;CL:0002032,1.80e-17,161;CL:0000837,1.80e-17,161;CL:0002031,6.89e-15,120;CL:0000817,2.63e-07,3;CL:0000784,3.45e-07,3;CL:0000226,9.48e-07,3;CL:0000842,9.48e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.69e-18;53 | |||
|ontology_enrichment_disease=DOID:0060058!8.58e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.93e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.83e-09,10;DOID:2531,4.12e-08,51;DOID:0060083,4.12e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.36e-12!102;UBERON:0003061!7.36e-12!102;UBERON:0000178!1.00e-11!15;UBERON:0000179!1.00e-11!15;UBERON:0000463!1.00e-11!15;UBERON:0007023!1.61e-11!115;UBERON:0002193!2.66e-11!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.05e-18;15!UBERON:0000179;9.05e-18;15!UBERON:0000463;9.05e-18;15!UBERON:0002390;6.91e-17;32!UBERON:0002193;2.80e-11;42!UBERON:0004177;3.81e-10;5!UBERON:0005057;3.81e-10;5!UBERON:0002106;3.04e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.43e-18,15;UBERON:0000179,9.43e-18,15;UBERON:0000463,9.43e-18,15;UBERON:0002193,7.22e-09,108;UBERON:0002390,1.06e-08,98;UBERON:0003061,1.06e-08,98;UBERON:0002106,2.98e-07,3;UBERON:0004854,2.98e-07,3;UBERON:0009034,2.98e-07,3;UBERON:0002095,2.98e-07,3;UBERON:0004782,2.98e-07,3;UBERON:0003281,2.98e-07,3;UBERON:0009664,2.98e-07,3;UBERON:0002296,2.98e-07,3;UBERON:0005602,2.98e-07,3;UBERON:0001179,2.98e-07,3;UBERON:0006293,2.98e-07,3;UBERON:0004177,5.03e-07,7;UBERON:0005057,5.03e-07,7 | |||
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| ||
|short_description=p1@IGHM | |||
}} | }} |
Latest revision as of 21:08, 18 September 2015
Short description: | p1@IGHM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHM_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -1bp_to_X58529_5end |
EntrezGene: | IGHM |
HGNC: | 5541 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.86e-49 | 24 |
pro-B cell | 2.86e-49 | 24 |
B cell | 4.23e-30 | 14 |
lymphocyte | 7.74e-29 | 53 |
common lymphoid progenitor | 7.74e-29 | 53 |
lymphoid lineage restricted progenitor cell | 2.86e-27 | 52 |
hematopoietic stem cell | 1.72e-22 | 168 |
leukocyte | 2.17e-22 | 136 |
nongranular leukocyte | 8.17e-21 | 115 |
hematopoietic cell | 1.46e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.80e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 6.89e-15 | 120 |
precursor B cell | 2.63e-07 | 3 |
plasmacytoid dendritic cell | 3.45e-07 | 3 |
single nucleate cell | 9.48e-07 | 3 |
mononuclear cell | 9.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 9.43e-18 | 15 |
haemolymphatic fluid | 9.43e-18 | 15 |
organism substance | 9.43e-18 | 15 |
hemolymphoid system | 7.22e-09 | 108 |
hematopoietic system | 1.06e-08 | 98 |
blood island | 1.06e-08 | 98 |
spleen | 2.98e-07 | 3 |
gastrointestinal system mesentery | 2.98e-07 | 3 |
stomach region | 2.98e-07 | 3 |
mesentery | 2.98e-07 | 3 |
gastrointestinal system serosa | 2.98e-07 | 3 |
mesentery of stomach | 2.98e-07 | 3 |
gut mesentery | 2.98e-07 | 3 |
dorsal mesentery | 2.98e-07 | 3 |
dorsal mesogastrium | 2.98e-07 | 3 |
peritoneal cavity | 2.98e-07 | 3 |
spleen primordium | 2.98e-07 | 3 |
hemopoietic organ | 5.03e-07 | 7 |
immune organ | 5.03e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.83e-09 | 10 |
hematologic cancer | 4.12e-08 | 51 |
immune system cancer | 4.12e-08 | 51 |