FFCP PHASE1:Hg19::chr17:17184524..17184538,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8533 | |EntrezGene=8533 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2239 | |HGNC=2239 | ||
|TSSclassifier=strong | |||
|UniProt=C9JLV5 | |UniProt=C9JLV5 | ||
|association_with_transcript=14bp_to_ENST00000417352_5end | |association_with_transcript=14bp_to_ENST00000417352_5end | ||
|cluster_id=chr17:17184524..17184538,- | |||
|description=CAGE_peak_4_at_COPS3_5end | |description=CAGE_peak_4_at_COPS3_5end | ||
|id=chr17:17184524..17184538,- | |id=chr17:17184524..17184538,- | ||
|ontology_enrichment_celltype=CL:0000037!3.07e-15!172;CL:0000566!3.07e-15!172;CL:0002032!5.76e-14!165;CL:0000837!5.76e-14!165;CL:0000988!2.77e-13!182;CL:0000012!1.80e-10!682;CL:0000763!1.91e-10!112;CL:0000049!1.91e-10!112;CL:0000548!1.86e-09!679;CL:0000004!1.86e-09!679;CL:0000255!1.86e-09!679;CL:0000003!1.37e-08!722;CL:0000063!1.02e-07!578;CL:0002031!1.38e-07!124;CL:0000738!6.55e-07!140;CL:0002087!8.94e-07!119 | |ontology_enrichment_celltype=CL:0000037!3.07e-15!172;CL:0000566!3.07e-15!172;CL:0002032!5.76e-14!165;CL:0000837!5.76e-14!165;CL:0000988!2.77e-13!182;CL:0000012!1.80e-10!682;CL:0000763!1.91e-10!112;CL:0000049!1.91e-10!112;CL:0000548!1.86e-09!679;CL:0000004!1.86e-09!679;CL:0000255!1.86e-09!679;CL:0000003!1.37e-08!722;CL:0000063!1.02e-07!578;CL:0002031!1.38e-07!124;CL:0000738!6.55e-07!140;CL:0002087!8.94e-07!119 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.02e-14,168;CL:0002032,1.85e-13,161;CL:0000837,1.85e-13,161;CL:0000988,3.64e-13,177;CL:0000763,5.57e-10,108;CL:0000049,5.57e-10,108;CL:0002031,3.61e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.65e-28!235;DOID:14566!8.92e-28!239;DOID:0050686!6.46e-19!137;DOID:2531!1.17e-17!51;DOID:0060083!1.17e-17!51;DOID:1240!1.48e-14!39;DOID:8692!3.11e-11!31;DOID:0050687!6.03e-11!143;DOID:305!7.45e-11!106 | |ontology_enrichment_disease=DOID:162!1.65e-28!235;DOID:14566!8.92e-28!239;DOID:0050686!6.46e-19!137;DOID:2531!1.17e-17!51;DOID:0060083!1.17e-17!51;DOID:1240!1.48e-14!39;DOID:8692!3.11e-11!31;DOID:0050687!6.03e-11!143;DOID:305!7.45e-11!106 | ||
|ontology_enrichment_disease_v019=DOID:1240;2.34e-11;39!DOID:2531;3.20e-11;51!DOID:0060083;3.20e-11;51!DOID:8692;6.56e-11;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.65e-28,235;DOID:14566,8.91e-28,239;DOID:0050686,6.45e-19,137;DOID:2531,1.16e-17,51;DOID:0060083,1.16e-17,51;DOID:1240,1.47e-14,39;DOID:8692,3.11e-11,31;DOID:0050687,6.03e-11,143;DOID:305,7.45e-11,106 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@COPS3 | |short_description=p4@COPS3 | ||
}} | }} |
Latest revision as of 21:13, 18 September 2015
Short description: | p4@COPS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_COPS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000417352_5end |
EntrezGene: | COPS3 |
HGNC: | 2239 |
UniProt: | C9JLV5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.02e-14 | 168 |
hematopoietic oligopotent progenitor cell | 1.85e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-13 | 161 |
hematopoietic cell | 3.64e-13 | 177 |
myeloid cell | 5.57e-10 | 108 |
common myeloid progenitor | 5.57e-10 | 108 |
hematopoietic lineage restricted progenitor cell | 3.61e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.65e-28 | 235 |
disease of cellular proliferation | 8.91e-28 | 239 |
organ system cancer | 6.45e-19 | 137 |
hematologic cancer | 1.16e-17 | 51 |
immune system cancer | 1.16e-17 | 51 |
leukemia | 1.47e-14 | 39 |
myeloid leukemia | 3.11e-11 | 31 |
cell type cancer | 6.03e-11 | 143 |
carcinoma | 7.45e-11 | 106 |