FFCP PHASE1:Hg19::chr11:62566757..62566787,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10482 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=8071 | |||
|TSSclassifier=strong | |||
|UniProt=Q68CW9 | |||
|association_with_transcript=52bp_to_CR749674_5end | |||
|cluster_id=chr11:62566757..62566787,- | |||
|description=CAGE_peak_5_at_NXF1_5end | |||
|id=chr11:62566757..62566787,- | |||
|ontology_enrichment_celltype=CL:0000037!4.50e-12!172;CL:0000566!4.50e-12!172;CL:0000738!7.45e-12!140;CL:0002032!7.96e-11!165;CL:0000837!7.96e-11!165;CL:0000988!9.26e-11!182;CL:0002031!3.87e-10!124;CL:0002087!5.01e-10!119;CL:0002057!2.51e-08!42;CL:0000860!1.96e-07!45;CL:0000557!5.20e-07!71;CL:0000763!7.45e-07!112;CL:0000049!7.45e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000771;9.81e-11;2!CL:0001014;1.65e-10;2!CL:0001016;1.65e-10;2!CL:0002393;5.15e-08;6!CL:0002397;5.15e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,9.41e-11,2;CL:0001014,1.25e-10,2;CL:0001016,1.25e-10,2;CL:0000988,1.79e-09,177;CL:0000037,3.15e-09,168;CL:0000738,6.75e-09,136;CL:0002032,8.70e-09,161;CL:0000837,8.70e-09,161;CL:0000763,1.80e-07,108;CL:0000049,1.80e-07,108;CL:0000557,2.09e-07,67;CL:0002031,3.65e-07,120;CL:0002009,5.89e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.48e-08!235;DOID:14566!6.28e-08!239;DOID:0050687!5.25e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3307;5.51e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,6.10e-11,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.30e-10;2!UBERON:0002757;5.30e-10;2!UBERON:0010134;5.30e-10;2!UBERON:0005408;5.30e-10;2!UBERON:0001899;5.30e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.33e-10,2;UBERON:0002757,5.33e-10,2;UBERON:0010134,5.33e-10,2;UBERON:0005408,5.33e-10,2;UBERON:0001899,5.33e-10,2;UBERON:0002371,1.95e-07,76 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0.464448369948228,0,0,0,0.232401601740905,0.853015394924529,0,7.75593571944628,5.21415563422368,4.99125002646459,0.223915474239924,0,1.03030227053675,0.290796477559129,0.377875943688809,0,0.697287110717054,0.411167888021826,1.54853185447552,0.28769239232215,0.256160706529101,0.945928919554341,0.689491361473237,0,0,0.752969358170419,0.272906150057846,0.674170453335254,1.22433556948361,0.320929027076094,0.639337125799041,0.329851300186716,0.398927315243264,0,0.290209238628584,0,0.622822248995575,1.00499466102697,2.08593167368081,0.217188844705117,1.21079900526674,0,0.632924774881769,0.211255286311942,0,0.209658645508376,0,0.600707571366025,0,0,0.39783335439818,0,0,0,0,0.853460445133014,0,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0,0,1.12101712596307,0,0.196709770113833,1.57204305099666,0.822405995998037,0.334372990781356,0.32592226663359,0,0,0.222820913770347,0,0.221533894583621,0.812411591295047,0.512365278902701,0.260118695119756,0.657751618414705,0,0.579606171470105,0.444859689486181,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0.80642697289893,1.60464117470104,1.01377082717959,0,0,0,0,0,0.144846518960824,0,0.973269740605272,0,0,0.087834785693126,0.130979075497713,0,0,0,0.696518949197069,0.26591592103773,0.476981248610684,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0.176096868026452,0.207328115540772,0.288239906833923,0.37872730027914,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0.179060963239896,0.784596007954691,0.394061520403854,0.431255149719035,1.54011643535698,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0,0.473107245101804,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.640365346820666,0.606255142892519,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0.219259876645935,0,0,0,0,0.412164046590889,0.0915694648183434,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,1.58510321173008,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0.962479855263359,0.245040215981032,0.185803175125719,1.00988449083511,0.995985806877798,0.478278818186467,0.199579371432817,0,0.423347165447766,0.324621940274555,0,2.51058146936511,0,15.038068625404,0,0.481764225311099,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0.811367035427949,0.33307196799782,0,0,0,0.121360521749513,0,0,0,0.296964680832639,0.307160702099232,0,0,0.445234820091624,0.16480387422676,4.64475897881586,0.398495976502139,0.552567831062295,1.0077309914171,0.818149460017238,0.123084805461069,0,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,1.11136990144637,0,0.185536196323703,0,1.04171104434093,0.0874599999961957,0,0,0.508507300585533,0,0,0.291604613383254,0.173624994933292,0,0.241192877250816,0,0.442317039724898,0,0.219385397153973,0.10893846351899,0.139423744278603,0.230850775511391,0,0,0.179515288819544,0.108647371922008,0.638002319463839,0.183195186803725,1.06606955203727,1.02193298195737,0.156980256395025,0,0,0,0,0.75901493089674,0.476809736941136,0,0.652931232636591,0.141353071433941,0,0,0.353830258013357,0.611030144933625,0.296521128680622,0,0,0,0,0,0.182454789215666,0,0,0.394584402849391,0,0.30607276163049,0,0.450970258243478,0,0.664653872707185,0,0,0,0,0.277349346026277,0.173559738335131,0.293977192243133,0.261177619741208,0.52418000472609,0.51595809741485,0,0.0730893170861856,0,0.193978032976839,0.264768380074501,0.225980740780532,0.274083849293502,0,0.126621591911757,0.195551382734803,0,0.85381197895741,0.19980960958213,0.144090417154106,0.229073192331831,0.171594997861965,0.14405479798815,0.49701014226173,0,0.407712618220842,0,0.203996435272644,0,0,0.410716136675979,1.27746588066972,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,4.65983798109815,0,0,0.0674035438541849,0.196854963029498,0.254019996197353,0,0,0,0,0,1.349843349309,6.1904156364636,0,0,0,0.209818352539992,0.211200673038813,0,0.191915197319445,0.714695326373367,0.66209197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| |||
|short_description=p5@NXF1 | |||
}} |
Latest revision as of 21:36, 18 September 2015
Short description: | p5@NXF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NXF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_CR749674_5end |
EntrezGene: | NXF1 |
HGNC: | 8071 |
UniProt: | Q68CW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 9.41e-11 | 2 |
CD1a-positive Langerhans cell | 1.25e-10 | 2 |
immature CD1a-positive Langerhans cell | 1.25e-10 | 2 |
hematopoietic cell | 1.79e-09 | 177 |
hematopoietic stem cell | 3.15e-09 | 168 |
leukocyte | 6.75e-09 | 136 |
hematopoietic oligopotent progenitor cell | 8.70e-09 | 161 |
hematopoietic multipotent progenitor cell | 8.70e-09 | 161 |
myeloid cell | 1.80e-07 | 108 |
common myeloid progenitor | 1.80e-07 | 108 |
granulocyte monocyte progenitor cell | 2.09e-07 | 67 |
hematopoietic lineage restricted progenitor cell | 3.65e-07 | 120 |
macrophage dendritic cell progenitor | 5.89e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
pineal body | 5.33e-10 | 2 |
regional part of epithalamus | 5.33e-10 | 2 |
secretory circumventricular organ | 5.33e-10 | 2 |
circumventricular organ | 5.33e-10 | 2 |
epithalamus | 5.33e-10 | 2 |
bone marrow | 1.95e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
teratoma | 6.10e-11 | 2 |