FFCP PHASE1:Hg19::chr7:48211048..48211063,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=154664 | |EntrezGene=154664 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14638 | |HGNC=14638 | ||
|TSSclassifier=strong | |||
|UniProt=Q86UQ4 | |UniProt=Q86UQ4 | ||
|association_with_transcript=0bp_to_ENST00000417403,ENST00000435803,NM_152701,uc003top.2,uc003toq.2,uc010kyr.2_5end | |association_with_transcript=0bp_to_ENST00000417403,ENST00000435803,NM_152701,uc003top.2,uc003toq.2,uc010kyr.2_5end | ||
|cluster_id=chr7:48211048..48211063,+ | |||
|description=CAGE_peak_1_at_ABCA13_5end | |description=CAGE_peak_1_at_ABCA13_5end | ||
|id=chr7:48211048..48211063,+ | |id=chr7:48211048..48211063,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.58e-09;8!CL:0000081;4.02e-09;11!CL:0002564;4.09e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.59e-09,8;CL:0000081,3.99e-09,11;CL:0002564,4.11e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;7.85e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.48e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.15e-08!115;UBERON:0000153!7.24e-07!129;UBERON:0007811!7.24e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!1.15e-08!115;UBERON:0000153!7.24e-07!129;UBERON:0007811!7.24e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.78e-10;5!UBERON:0002216;1.78e-10;5!UBERON:0011134;1.78e-10;5!UBERON:0002209;1.78e-10;5!UBERON:0002213;1.78e-10;5!UBERON:0007844;1.78e-10;5!UBERON:0011138;1.78e-10;5!UBERON:0001130;1.78e-10;5!UBERON:0001066;1.78e-10;5!UBERON:0001468;1.78e-10;5!UBERON:0002390;2.91e-10;32!UBERON:0002242;4.09e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,2.41e-10,5;UBERON:0002216,2.41e-10,5;UBERON:0011134,2.41e-10,5;UBERON:0002209,2.41e-10,5;UBERON:0002213,2.41e-10,5;UBERON:0005856,2.41e-10,5;UBERON:0005866,2.41e-10,5;UBERON:0005863,2.41e-10,5;UBERON:0007844,2.41e-10,5;UBERON:0011138,2.41e-10,5;UBERON:0001130,2.41e-10,5;UBERON:0001066,2.41e-10,5;UBERON:0001468,2.41e-10,5;UBERON:0000974,1.59e-07,10;UBERON:0002242,4.11e-07,3;UBERON:0003068,4.11e-07,3;UBERON:0002328,4.11e-07,3;UBERON:0004880,4.11e-07,3 | |||
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| ||
|short_description=p1@ABCA13 | |short_description=p1@ABCA13 | ||
}} | }} |
Latest revision as of 22:15, 18 September 2015
Short description: | p1@ABCA13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABCA13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000417403, ENST00000435803, NM_152701, uc003top.2, uc003toq.2, uc010kyr.2_5end |
EntrezGene: | ABCA13 |
HGNC: | 14638 |
UniProt: | Q86UQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.59e-09 | 8 |
blood cell | 3.99e-09 | 11 |
nucleus pulposus cell of intervertebral disc | 4.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 2.41e-10 | 5 |
symphysis | 2.41e-10 | 5 |
nonsynovial joint | 2.41e-10 | 5 |
fibrous joint | 2.41e-10 | 5 |
cartilaginous joint | 2.41e-10 | 5 |
developing mesenchymal condensation | 2.41e-10 | 5 |
pre-cartilage condensation | 2.41e-10 | 5 |
cartilaginous condensation | 2.41e-10 | 5 |
cartilage element | 2.41e-10 | 5 |
post-cranial axial skeletal system | 2.41e-10 | 5 |
vertebral column | 2.41e-10 | 5 |
intervertebral disk | 2.41e-10 | 5 |
intervertebral joint | 2.41e-10 | 5 |
neck | 1.59e-07 | 10 |
nucleus pulposus | 4.11e-07 | 3 |
axial mesoderm | 4.11e-07 | 3 |
notochord | 4.11e-07 | 3 |
chordamesoderm | 4.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.48e-07 | 14 |