FFCP PHASE1:Hg19::chr12:52695617..52695623,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3892 | |EntrezGene=3892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6463 | |HGNC=6463 | ||
|TSSclassifier=strong | |||
|UniProt=O43790 | |UniProt=O43790 | ||
|association_with_transcript=-25bp_to_ENST00000293525,NM_002284,uc001sad.2_5end | |association_with_transcript=-25bp_to_ENST00000293525,NM_002284,uc001sad.2_5end | ||
|cluster_id=chr12:52695617..52695623,+ | |||
|coexpression_cluster_id=C208 | |coexpression_cluster_id=C208 | ||
|description=CAGE_peak_4_at_KRT86_5end | |description=CAGE_peak_4_at_KRT86_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002150!8.29e-08!3;CL:0000861!8.29e-08!3 | |ontology_enrichment_celltype=CL:0002150!8.29e-08!3;CL:0000861!8.29e-08!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.39e-66;1 | |ontology_enrichment_development_v019=UBERON:0000358;2.39e-66;1 | ||
|ontology_enrichment_disease=DOID:0060084!5.54e-08!3;DOID:127!5.54e-08!3 | |ontology_enrichment_disease=DOID:0060084!5.54e-08!3;DOID:127!5.54e-08!3 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007029!1.53e-21!1;UBERON:0002426!2.30e-21!1;UBERON:0003831!2.30e-21!1;UBERON:0003898!2.30e-21!1;UBERON:0004830!2.30e-21!1;UBERON:0001774!2.30e-21!1;UBERON:0003830!2.30e-21!1;UBERON:0005175!2.30e-21!1;UBERON:0003897!2.30e-21!1;UBERON:0001103!2.30e-21!1;UBERON:0010084!2.30e-21!1;UBERON:0001630!2.23e-11!2;UBERON:0005090!2.23e-11!2 | |ontology_enrichment_uberon=UBERON:0007029!1.53e-21!1;UBERON:0002426!2.30e-21!1;UBERON:0003831!2.30e-21!1;UBERON:0003898!2.30e-21!1;UBERON:0004830!2.30e-21!1;UBERON:0001774!2.30e-21!1;UBERON:0003830!2.30e-21!1;UBERON:0005175!2.30e-21!1;UBERON:0003897!2.30e-21!1;UBERON:0001103!2.30e-21!1;UBERON:0010084!2.30e-21!1;UBERON:0001630!2.23e-11!2;UBERON:0005090!2.23e-11!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.23e-66;1!UBERON:0002426;4.66e-66;1!UBERON:0003831;4.66e-66;1!UBERON:0003898;4.66e-66;1!UBERON:0004830;4.66e-66;1!UBERON:0003830;4.66e-66;1!UBERON:0005175;4.66e-66;1!UBERON:0001774;4.66e-66;1!UBERON:0001103;4.66e-66;1!UBERON:0005090;7.05e-34;2!UBERON:0001630;7.05e-34;2!UBERON:0000014;7.35e-18;4!UBERON:0000922;1.35e-08;49!UBERON:0002331;6.13e-08;10!UBERON:0001443;2.63e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0007029;1.23e-66;1!UBERON:0002426;4.66e-66;1!UBERON:0003831;4.66e-66;1!UBERON:0003898;4.66e-66;1!UBERON:0004830;4.66e-66;1!UBERON:0003830;4.66e-66;1!UBERON:0005175;4.66e-66;1!UBERON:0001774;4.66e-66;1!UBERON:0001103;4.66e-66;1!UBERON:0005090;7.05e-34;2!UBERON:0001630;7.05e-34;2!UBERON:0000014;7.35e-18;4!UBERON:0000922;1.35e-08;49!UBERON:0002331;6.13e-08;10!UBERON:0001443;2.63e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.23e-66,1;UBERON:0002426,4.66e-66,1;UBERON:0003831,4.66e-66,1;UBERON:0003898,4.66e-66,1;UBERON:0004830,4.66e-66,1;UBERON:0003830,4.66e-66,1;UBERON:0005175,4.66e-66,1;UBERON:0001774,4.66e-66,1;UBERON:0001103,4.66e-66,1;UBERON:0010084,4.66e-66,1;UBERON:0005090,7.05e-34,2;UBERON:0001630,7.05e-34,2;UBERON:0000014,7.35e-18,4;UBERON:0002331,6.13e-08,10;UBERON:0000358,6.13e-08,10;UBERON:0000307,6.13e-08,10;UBERON:0000091,6.13e-08,10;UBERON:0000087,6.13e-08,10;UBERON:0007010,6.13e-08,10;UBERON:0007806,6.13e-08,10;UBERON:0008780,6.13e-08,10;UBERON:0005728,6.13e-08,10;UBERON:0001443,2.63e-07,11 | |||
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|short_description=p4@KRT86 | |short_description=p4@KRT86 | ||
}} | }} |
Latest revision as of 22:24, 18 September 2015
Short description: | p4@KRT86 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KRT86_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | -25bp_to_ENST00000293525, NM_002284, uc001sad.2_5end |
EntrezGene: | KRT86 |
HGNC: | 6463 |
UniProt: | O43790 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface | 1.23e-66 | 1 |
chest muscle | 4.66e-66 | 1 |
respiratory system muscle | 4.66e-66 | 1 |
skeletal muscle of trunk | 4.66e-66 | 1 |
respiratory system skeletal muscle | 4.66e-66 | 1 |
thoracic segment muscle | 4.66e-66 | 1 |
chest organ | 4.66e-66 | 1 |
muscle of trunk | 4.66e-66 | 1 |
diaphragm | 4.66e-66 | 1 |
future diaphragm | 4.66e-66 | 1 |
muscle structure | 7.05e-34 | 2 |
muscle organ | 7.05e-34 | 2 |
zone of skin | 7.35e-18 | 4 |
umbilical cord | 6.13e-08 | 10 |
blastocyst | 6.13e-08 | 10 |
blastula | 6.13e-08 | 10 |
bilaminar disc | 6.13e-08 | 10 |
inner cell mass | 6.13e-08 | 10 |
cleaving embryo | 6.13e-08 | 10 |
connecting stalk | 6.13e-08 | 10 |
inner cell mass derived epiblast | 6.13e-08 | 10 |
extraembryonic mesoderm | 6.13e-08 | 10 |
chest | 2.63e-07 | 11 |