FFCP PHASE1:Hg19::chr7:50343800..50343811,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:50343800..50343811,+
|short_description=p8@IKZF1
|description=CAGE_peak_8_at_IKZF1_5end
|association_with_transcript=80bp_to_ENST00000484847_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10320 | |EntrezGene=10320 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13176 | |HGNC=13176 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=80bp_to_ENST00000484847_5end | |||
|cluster_id=chr7:50343800..50343811,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_8_at_IKZF1_5end | |||
|id=chr7:50343800..50343811,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.29e-56!172;CL:0000566!4.29e-56!172;CL:0000542!9.20e-55!53;CL:0000051!9.20e-55!53;CL:0000838!7.71e-54!52;CL:0000988!2.75e-51!182;CL:0002032!3.66e-50!165;CL:0000837!3.66e-50!165;CL:0000738!1.22e-40!140;CL:0002031!4.11e-34!124;CL:0002087!8.06e-33!119;CL:0000084!2.30e-30!25;CL:0000827!2.30e-30!25;CL:0000791!3.52e-25!18;CL:0000789!3.52e-25!18;CL:0002420!3.52e-25!18;CL:0002419!3.52e-25!18;CL:0000790!3.52e-25!18;CL:0000945!2.31e-20!24;CL:0000826!2.31e-20!24;CL:0000625!3.47e-16!11;CL:0000236!3.37e-12!14;CL:0000134!8.00e-12!358;CL:0002320!4.16e-11!365;CL:0000763!1.29e-10!112;CL:0000049!1.29e-10!112;CL:0000624!2.46e-09!6;CL:0000219!1.19e-08!390;CL:0000048!7.42e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.61e-51;18!CL:0000789;3.61e-51;18!CL:0002419;3.61e-51;18!CL:0000084;3.44e-49;25!CL:0000625;8.41e-32;11!CL:0000542;7.12e-30;53!CL:0000624;4.29e-18;6!CL:0000236;2.54e-10;13!CL:0000623;4.47e-10;3!CL:0000898;1.37e-09;3!CL:0000226;4.57e-09;3!CL:0000842;4.57e-09;3!CL:0002087;7.22e-08;104!CL:0000815;4.05e-07;2!CL:0000792;4.05e-07;2!CL:0002677;4.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.05e-52,52;CL:0000791,1.85e-51,18;CL:0000789,1.85e-51,18;CL:0002420,1.85e-51,18;CL:0002419,1.85e-51,18;CL:0000790,1.85e-51,18;CL:0000542,4.34e-51,53;CL:0000051,4.34e-51,53;CL:0000084,1.65e-49,25;CL:0000827,1.65e-49,25;CL:0000625,2.19e-32,11;CL:0000738,3.02e-28,136;CL:0002087,1.29e-24,115;CL:0000037,1.84e-23,168;CL:0000988,1.02e-21,177;CL:0002031,1.22e-21,120;CL:0002032,2.62e-18,161;CL:0000837,2.62e-18,161;CL:0000624,6.41e-18,6;CL:0000623,3.51e-10,3;CL:0000825,3.51e-10,3;CL:0000236,1.20e-09,14;CL:0000898,1.46e-09,3;CL:0000226,3.54e-09,3;CL:0000842,3.54e-09,3;CL:0000815,3.59e-07,2;CL:0000792,3.59e-07,2;CL:0002677,3.59e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.61e-51;18!CL:0000051;7.12e-30;53!CL:0002425;6.38e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!6.04e-26!51;DOID:0060083!6.04e-26!51;DOID:1240!5.96e-19!39;DOID:8692!9.57e-13!31;DOID:0060058!1.61e-10!10;DOID:1036!2.40e-08!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.83e-10!375;UBERON:0004177!3.85e-09!7;UBERON:0002390!3.43e-07!102;UBERON:0003061!3.43e-07!102;UBERON:0002193!5.70e-07!112;UBERON:0002370!6.97e-07!4;UBERON:0005058!6.97e-07!4;UBERON:0009113!6.97e-07!4;UBERON:0003295!6.97e-07!4;UBERON:0005562!6.97e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.90e-11;15!UBERON:0000179;2.90e-11;15!UBERON:0000463;2.90e-11;15!UBERON:0002390;5.18e-08;32!UBERON:0002370;8.93e-08;2!UBERON:0005058;8.93e-08;2!UBERON:0009113;8.93e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.00e-13,4;UBERON:0005058,9.00e-13,4;UBERON:0009113,9.00e-13,4;UBERON:0003295,9.00e-13,4;UBERON:0005562,9.00e-13,4;UBERON:0000178,2.79e-11,15;UBERON:0000179,2.79e-11,15;UBERON:0000463,2.79e-11,15;UBERON:0003351,1.63e-08,6;UBERON:0004177,2.71e-07,7;UBERON:0005057,2.71e-07,7 | |||
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| ||
|short_description=p8@IKZF1 | |||
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Latest revision as of 22:47, 18 September 2015
Short description: | p8@IKZF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_IKZF1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 80bp_to_ENST00000484847_5end |
EntrezGene: | IKZF1 |
HGNC: | 13176 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.05e-52 | 52 |
mature alpha-beta T cell | 1.85e-51 | 18 |
alpha-beta T cell | 1.85e-51 | 18 |
immature T cell | 1.85e-51 | 18 |
mature T cell | 1.85e-51 | 18 |
immature alpha-beta T cell | 1.85e-51 | 18 |
lymphocyte | 4.34e-51 | 53 |
common lymphoid progenitor | 4.34e-51 | 53 |
T cell | 1.65e-49 | 25 |
pro-T cell | 1.65e-49 | 25 |
CD8-positive, alpha-beta T cell | 2.19e-32 | 11 |
leukocyte | 3.02e-28 | 136 |
nongranular leukocyte | 1.29e-24 | 115 |
hematopoietic stem cell | 1.84e-23 | 168 |
hematopoietic cell | 1.02e-21 | 177 |
hematopoietic lineage restricted progenitor cell | 1.22e-21 | 120 |
hematopoietic oligopotent progenitor cell | 2.62e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.62e-18 | 161 |
CD4-positive, alpha-beta T cell | 6.41e-18 | 6 |
natural killer cell | 3.51e-10 | 3 |
pro-NK cell | 3.51e-10 | 3 |
B cell | 1.20e-09 | 14 |
naive T cell | 1.46e-09 | 3 |
single nucleate cell | 3.54e-09 | 3 |
mononuclear cell | 3.54e-09 | 3 |
regulatory T cell | 3.59e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.59e-07 | 2 |
naive regulatory T cell | 3.59e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 9.00e-13 | 4 |
hemolymphoid system gland | 9.00e-13 | 4 |
thymic region | 9.00e-13 | 4 |
pharyngeal gland | 9.00e-13 | 4 |
thymus primordium | 9.00e-13 | 4 |
blood | 2.79e-11 | 15 |
haemolymphatic fluid | 2.79e-11 | 15 |
organism substance | 2.79e-11 | 15 |
pharyngeal epithelium | 1.63e-08 | 6 |
hemopoietic organ | 2.71e-07 | 7 |
immune organ | 2.71e-07 | 7 |