FFCP PHASE1:Hg19::chrX:107288353..107288356,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340547 | |EntrezGene=340547 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28675 | |HGNC=28675 | ||
|TSSclassifier=strong | |||
|UniProt=C9JY48 | |UniProt=C9JY48 | ||
|association_with_transcript=58bp_to_ENST00000458383_5end | |association_with_transcript=58bp_to_ENST00000458383_5end | ||
|cluster_id=chrX:107288353..107288356,+ | |||
|coexpression_cluster_id=C238 | |coexpression_cluster_id=C238 | ||
|description=CAGE_peak_8_at_VSIG1_5end | |description=CAGE_peak_8_at_VSIG1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002178!1.30e-09!3 | |ontology_enrichment_celltype=CL:0002178!1.30e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;9.45e-18;3 | |ontology_enrichment_celltype_v019=CL:0002178;9.45e-18;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.12e-17,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.44e-21;10!UBERON:0005564;9.44e-21;10 | |ontology_enrichment_development_v019=UBERON:0009117;9.44e-21;10!UBERON:0005564;9.44e-21;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.71e-13!8;UBERON:0000945!1.71e-13!8;UBERON:0010039!1.71e-13!8;UBERON:0003135!4.42e-10!11;UBERON:0002110!1.54e-09!3;UBERON:0006242!1.54e-09!3;UBERON:0005409!7.08e-07!35 | |ontology_enrichment_uberon=UBERON:0000473!1.71e-13!8;UBERON:0000945!1.71e-13!8;UBERON:0010039!1.71e-13!8;UBERON:0003135!4.42e-10!11;UBERON:0002110!1.54e-09!3;UBERON:0006242!1.54e-09!3;UBERON:0005409!7.08e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;2.22e-40;5!UBERON:0010039;2.22e-40;5!UBERON:0000473;1.26e-25;8!UBERON:0003135;5.63e-19;11!UBERON:0001041;3.17e-15;14!UBERON:0000991;1.77e-10;21!UBERON:0003101;4.74e-10;22!UBERON:0000079;4.74e-10;22!UBERON:0005409;1.07e-09;22 | |ontology_enrichment_uberon_v019=UBERON:0000945;2.22e-40;5!UBERON:0010039;2.22e-40;5!UBERON:0000473;1.26e-25;8!UBERON:0003135;5.63e-19;11!UBERON:0001041;3.17e-15;14!UBERON:0000991;1.77e-10;21!UBERON:0003101;4.74e-10;22!UBERON:0000079;4.74e-10;22!UBERON:0005409;1.07e-09;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.11e-25,8;UBERON:0000945,1.11e-25,8;UBERON:0010039,1.11e-25,8;UBERON:0003135,5.14e-19,11;UBERON:0000991,1.69e-10,21;UBERON:0009196,1.69e-10,21;UBERON:0009117,1.69e-10,21;UBERON:0005564,1.69e-10,21;UBERON:0004176,4.53e-10,22;UBERON:0003101,4.53e-10,22;UBERON:0000079,4.53e-10,22;UBERON:0005409,1.11e-08,25 | |||
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|short_description=p8@VSIG1 | |short_description=p8@VSIG1 | ||
}} | }} |
Latest revision as of 23:11, 18 September 2015
Short description: | p8@VSIG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_VSIG1_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 58bp_to_ENST00000458383_5end |
EntrezGene: | VSIG1 |
HGNC: | 28675 |
UniProt: | C9JY48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.12e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.11e-25 | 8 |
stomach | 1.11e-25 | 8 |
food storage organ | 1.11e-25 | 8 |
male reproductive organ | 5.14e-19 | 11 |
gonad | 1.69e-10 | 21 |
indifferent external genitalia | 1.69e-10 | 21 |
indifferent gonad | 1.69e-10 | 21 |
gonad primordium | 1.69e-10 | 21 |
external genitalia | 4.53e-10 | 22 |
male organism | 4.53e-10 | 22 |
male reproductive system | 4.53e-10 | 22 |
gastrointestinal system | 1.11e-08 | 25 |