FFCP PHASE1:Hg19::chrX:107334983..107335024,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115201 | |EntrezGene=115201 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16489 | |HGNC=16489 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7J2,F5H3G3 | |UniProt=F8W7J2,F5H3G3 | ||
|association_with_transcript=0bp_to_ENST00000372246,ENST00000457035,ENST00000545696_5end | |association_with_transcript=0bp_to_ENST00000372246,ENST00000457035,ENST00000545696_5end | ||
|cluster_id=chrX:107334983..107335024,+ | |||
|description=CAGE_peak_1_at_ATG4A_5end | |description=CAGE_peak_1_at_ATG4A_5end | ||
|id=chrX:107334983..107335024,+ | |id=chrX:107334983..107335024,+ | ||
|ontology_enrichment_celltype=CL:0000542!3.89e-13!53;CL:0000051!3.89e-13!53;CL:0002031!7.38e-13!124;CL:0000838!9.77e-13!52;CL:0000738!2.86e-12!140;CL:0002087!6.95e-11!119;CL:0002032!1.09e-09!165;CL:0000837!1.09e-09!165;CL:0000037!1.11e-09!172;CL:0000566!1.11e-09!172;CL:0000988!4.22e-08!182;CL:0000945!3.60e-07!24;CL:0000826!3.60e-07!24 | |ontology_enrichment_celltype=CL:0000542!3.89e-13!53;CL:0000051!3.89e-13!53;CL:0002031!7.38e-13!124;CL:0000838!9.77e-13!52;CL:0000738!2.86e-12!140;CL:0002087!6.95e-11!119;CL:0002032!1.09e-09!165;CL:0000837!1.09e-09!165;CL:0000037!1.11e-09!172;CL:0000566!1.11e-09!172;CL:0000988!4.22e-08!182;CL:0000945!3.60e-07!24;CL:0000826!3.60e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.19e-07;53!CL:0000945;3.95e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.87e-13,53;CL:0000051,3.87e-13,53;CL:0000838,9.72e-13,52;CL:0002031,1.24e-12,120;CL:0000738,4.98e-12,136;CL:0002087,1.17e-10,115;CL:0002032,1.93e-09,161;CL:0000837,1.93e-09,161;CL:0000037,1.98e-09,168;CL:0000988,6.77e-08,177;CL:0000945,3.59e-07,24;CL:0000826,3.59e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;1.19e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@ATG4A | |short_description=p1@ATG4A | ||
}} | }} |
Latest revision as of 23:19, 18 September 2015
Short description: | p1@ATG4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATG4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000372246, ENST00000457035, ENST00000545696_5end |
EntrezGene: | ATG4A |
HGNC: | 16489 |
UniProt: | F8W7J2F5H3G3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.87e-13 | 53 |
common lymphoid progenitor | 3.87e-13 | 53 |
lymphoid lineage restricted progenitor cell | 9.72e-13 | 52 |
hematopoietic lineage restricted progenitor cell | 1.24e-12 | 120 |
leukocyte | 4.98e-12 | 136 |
nongranular leukocyte | 1.17e-10 | 115 |
hematopoietic oligopotent progenitor cell | 1.93e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.93e-09 | 161 |
hematopoietic stem cell | 1.98e-09 | 168 |
hematopoietic cell | 6.77e-08 | 177 |
lymphocyte of B lineage | 3.59e-07 | 24 |
pro-B cell | 3.59e-07 | 24 |