FFCP PHASE1:Hg19::chr1:66796212..66796231,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5142 | |EntrezGene=5142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8781 | |HGNC=8781 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJ03 | |UniProt=E9PJ03 | ||
|association_with_transcript=-179bp_to_ENST00000528771_5end | |association_with_transcript=-179bp_to_ENST00000528771_5end | ||
|cluster_id=chr1:66796212..66796231,+ | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_29_at_PDE4B_5end | |description=CAGE_peak_29_at_PDE4B_5end | ||
|id=chr1:66796212..66796231,+ | |id=chr1:66796212..66796231,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.08e-23!42;CL:0000860!8.79e-22!45;CL:0002009!1.17e-16!65;CL:0000766!1.38e-16!76;CL:0002194!1.70e-15!63;CL:0000576!1.70e-15!63;CL:0000040!1.70e-15!63;CL:0000559!1.70e-15!63;CL:0000557!8.02e-15!71;CL:0000763!4.37e-14!112;CL:0000049!4.37e-14!112;CL:0000839!1.80e-13!70;CL:0000453!1.76e-10!5;CL:0000738!5.57e-10!140;CL:0002032!1.55e-07!165;CL:0000837!1.55e-07!165;CL:0000037!5.47e-07!172;CL:0000566!5.47e-07!172 | |ontology_enrichment_celltype=CL:0002057!1.08e-23!42;CL:0000860!8.79e-22!45;CL:0002009!1.17e-16!65;CL:0000766!1.38e-16!76;CL:0002194!1.70e-15!63;CL:0000576!1.70e-15!63;CL:0000040!1.70e-15!63;CL:0000559!1.70e-15!63;CL:0000557!8.02e-15!71;CL:0000763!4.37e-14!112;CL:0000049!4.37e-14!112;CL:0000839!1.80e-13!70;CL:0000453!1.76e-10!5;CL:0000738!5.57e-10!140;CL:0002032!1.55e-07!165;CL:0000837!1.55e-07!165;CL:0000037!5.47e-07!172;CL:0000566!5.47e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.65e-14;33!CL:0002057;1.65e-14;33!CL:0000473;3.32e-10;39!CL:0000234;3.32e-10;39!CL:0000576;3.61e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.79e-13,42;CL:0002057,7.79e-13,42;CL:0000473,3.34e-11,48;CL:0000234,3.34e-11,48;CL:0002194,6.52e-09,59;CL:0000576,6.52e-09,59;CL:0000040,6.52e-09,59;CL:0000559,6.52e-09,59;CL:0002009,1.29e-08,61;CL:0000839,5.96e-08,66;CL:0000557,7.87e-08,67;CL:0000766,2.84e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;5.44e-09;42!UBERON:0008814;6.67e-09;2!UBERON:0010056;6.67e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.00e-12!86;UBERON:0002371!1.37e-12!80;UBERON:0002405!3.30e-12!115;UBERON:0002390!3.96e-12!102;UBERON:0003061!3.96e-12!102;UBERON:0002193!1.38e-11!112;UBERON:0004765!4.61e-10!101;UBERON:0001434!4.61e-10!101;UBERON:0008814!5.80e-10!15;UBERON:0001042!7.12e-08!10;UBERON:0009145!7.12e-08!10;UBERON:0004089!1.09e-07!2;UBERON:0006562!3.98e-07!11;UBERON:0003081!7.74e-07!216;UBERON:0002204!8.76e-07!167 | |ontology_enrichment_uberon=UBERON:0001474!1.00e-12!86;UBERON:0002371!1.37e-12!80;UBERON:0002405!3.30e-12!115;UBERON:0002390!3.96e-12!102;UBERON:0003061!3.96e-12!102;UBERON:0002193!1.38e-11!112;UBERON:0004765!4.61e-10!101;UBERON:0001434!4.61e-10!101;UBERON:0008814!5.80e-10!15;UBERON:0001042!7.12e-08!10;UBERON:0009145!7.12e-08!10;UBERON:0004089!1.09e-07!2;UBERON:0006562!3.98e-07!11;UBERON:0003081!7.74e-07!216;UBERON:0002204!8.76e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;4.02e-21;3!UBERON:0001033;4.02e-21;3!UBERON:0002135;5.98e-17;1!UBERON:0002133;3.86e-09;2!UBERON:0003127;4.52e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,6.05e-21,3;UBERON:0001033,6.05e-21,3;UBERON:0010056,6.05e-21,3;UBERON:0002135,6.47e-17,1;UBERON:0002133,4.02e-09,2;UBERON:0003127,4.34e-09,2;UBERON:0001042,6.12e-07,10;UBERON:0009145,6.12e-07,10;UBERON:0002371,7.03e-07,76 | |||
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| ||
|short_description=p29@PDE4B | |short_description=p29@PDE4B | ||
}} | }} |
Latest revision as of 00:14, 19 September 2015
Short description: | p29@PDE4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_PDE4B_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | -179bp_to_ENST00000528771_5end |
EntrezGene: | PDE4B |
HGNC: | 8781 |
UniProt: | E9PJ03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.79e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.79e-13 | 42 |
defensive cell | 3.34e-11 | 48 |
phagocyte | 3.34e-11 | 48 |
monopoietic cell | 6.52e-09 | 59 |
monocyte | 6.52e-09 | 59 |
monoblast | 6.52e-09 | 59 |
promonocyte | 6.52e-09 | 59 |
macrophage dendritic cell progenitor | 1.29e-08 | 61 |
myeloid lineage restricted progenitor cell | 5.96e-08 | 66 |
granulocyte monocyte progenitor cell | 7.87e-08 | 67 |
myeloid leukocyte | 2.84e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
tongue | 6.05e-21 | 3 |
gustatory system | 6.05e-21 | 3 |
future tongue | 6.05e-21 | 3 |
mitral valve | 6.47e-17 | 1 |
atrioventricular valve | 4.02e-09 | 2 |
open tracheal system trachea | 4.34e-09 | 2 |
chordate pharynx | 6.12e-07 | 10 |
pharyngeal region of foregut | 6.12e-07 | 10 |
bone marrow | 7.03e-07 | 76 |