FFCP PHASE1:Hg19::chr19:48244361..48244372,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30846 | |EntrezGene=30846 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3243 | |HGNC=3243 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-122bp_to_AK026134_5end | |association_with_transcript=-122bp_to_AK026134_5end | ||
|cluster_id=chr19:48244361..48244372,+ | |||
|coexpression_cluster_id=C764 | |||
|description=CAGE_peak_3_at_EHD2_5end | |description=CAGE_peak_3_at_EHD2_5end | ||
|id=chr19:48244361..48244372,+ | |id=chr19:48244361..48244372,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.43e-22!180;CL:0000057!2.47e-17!75;CL:0000222!4.75e-11!119;CL:0000183!6.70e-10!59;CL:0000680!1.39e-08!57;CL:0000056!1.39e-08!57;CL:0000355!1.39e-08!57;CL:0000220!1.65e-08!246;CL:0000187!2.05e-08!54;CL:0002321!2.33e-08!248;CL:0002371!8.60e-08!591;CL:0000144!2.28e-07!625;CL:0000548!8.11e-07!679;CL:0000004!8.11e-07!679;CL:0000255!8.11e-07!679 | |ontology_enrichment_celltype=CL:0000055!6.43e-22!180;CL:0000057!2.47e-17!75;CL:0000222!4.75e-11!119;CL:0000183!6.70e-10!59;CL:0000680!1.39e-08!57;CL:0000056!1.39e-08!57;CL:0000355!1.39e-08!57;CL:0000220!1.65e-08!246;CL:0000187!2.05e-08!54;CL:0002321!2.33e-08!248;CL:0002371!8.60e-08!591;CL:0000144!2.28e-07!625;CL:0000548!8.11e-07!679;CL:0000004!8.11e-07!679;CL:0000255!8.11e-07!679 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.09e-15,76;CL:0000723,1.17e-07,433;CL:0000048,2.75e-07,427;CL:0000034,3.86e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.10e-11!95;UBERON:0004872!8.26e-11!84;UBERON:0000486!2.60e-08!82;UBERON:0005256!3.55e-08!143;UBERON:0000914!7.85e-08!83;UBERON:0002329!7.85e-08!83;UBERON:0003077!7.85e-08!83;UBERON:0003059!7.85e-08!83;UBERON:0007282!7.85e-08!83;UBERON:0009618!7.85e-08!83;UBERON:0007285!7.85e-08!83;UBERON:0001134!9.21e-08!61;UBERON:0002036!9.21e-08!61;UBERON:0003082!9.21e-08!61;UBERON:0002049!1.32e-07!79;UBERON:0007798!1.32e-07!79;UBERON:0002385!1.38e-07!63;UBERON:0001015!1.38e-07!63;UBERON:0000383!1.38e-07!63;UBERON:0004290!1.74e-07!70;UBERON:0003914!4.90e-07!118;UBERON:0001009!5.66e-07!113;UBERON:0004535!6.09e-07!110;UBERON:0000055!6.18e-07!69;UBERON:0001981!6.20e-07!60;UBERON:0007500!6.20e-07!60;UBERON:0004537!6.20e-07!60;UBERON:0006965!6.20e-07!60;UBERON:0000490!7.79e-07!138;UBERON:0001637!8.37e-07!42;UBERON:0003509!8.37e-07!42;UBERON:0004572!8.37e-07!42 | |ontology_enrichment_uberon=UBERON:0003102!2.10e-11!95;UBERON:0004872!8.26e-11!84;UBERON:0000486!2.60e-08!82;UBERON:0005256!3.55e-08!143;UBERON:0000914!7.85e-08!83;UBERON:0002329!7.85e-08!83;UBERON:0003077!7.85e-08!83;UBERON:0003059!7.85e-08!83;UBERON:0007282!7.85e-08!83;UBERON:0009618!7.85e-08!83;UBERON:0007285!7.85e-08!83;UBERON:0001134!9.21e-08!61;UBERON:0002036!9.21e-08!61;UBERON:0003082!9.21e-08!61;UBERON:0002049!1.32e-07!79;UBERON:0007798!1.32e-07!79;UBERON:0002385!1.38e-07!63;UBERON:0001015!1.38e-07!63;UBERON:0000383!1.38e-07!63;UBERON:0004290!1.74e-07!70;UBERON:0003914!4.90e-07!118;UBERON:0001009!5.66e-07!113;UBERON:0004535!6.09e-07!110;UBERON:0000055!6.18e-07!69;UBERON:0001981!6.20e-07!60;UBERON:0007500!6.20e-07!60;UBERON:0004537!6.20e-07!60;UBERON:0006965!6.20e-07!60;UBERON:0000490!7.79e-07!138;UBERON:0001637!8.37e-07!42;UBERON:0003509!8.37e-07!42;UBERON:0004572!8.37e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;9.35e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,9.10e-09,46;UBERON:0002416,9.10e-09,46;UBERON:0003102,2.49e-08,99;UBERON:0002097,5.31e-07,41 | |||
|phase1_expression=1.09007027562334,8.13581990785736,0,4.00293193412522,3.5756887554183,0.872338524100369,2.53299878168311,0,0.783556884599516,0,2.09340350391728,0,0.263766978228454,0,0.331397375727916,1.34465029290355,3.01347264011988,0.730310090387373,0.487932798790507,0.123121058076788,1.42800483870977,0.626909442956176,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,1.50602959389125,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.255725123687061,0.722878304769133,0.50133791063589,2.60723734129483,0,0.973269740605272,0.0945348171640679,0.443458794925128,0.263504357079378,0.196468613246569,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.694281003215189,0,0.419499436209906,4.40188867104108,0.626984899610432,1.03366703667732,0.35576626268671,1.33888245105868,2.01414658554573,0,3.41686880567437,0.735326160691737,3.24056779152704,0.535798369704479,0.44905874525234,0.450445921933289,0,0,0.366403487860815,0,0,0.872188104285069,1.98788780678127,0.379891534993739,1.05927344650575,0.860509862246441,1.06400514659507,0,1.06748995729705,0.49333509683432,0.311211035399766,1.0776853765575,0.653847612453835,1.05950199351452,2.30470369792,0,0,0,0.896692083310806,0.822041490506354,0.161872944368132,0.280901613404497,0.816616685019573,0.982674538494144,3.40975077880026,1.18800285728205,3.4617370098998,0,2.15585442544872,0.336672227908132,1.37630371859161,0.554128230968366,0.877955241761676,1.83892677479412,1.05166641234618,0.226864366320042,1.97328599257748,1.06778694409284,1.05965950579781,1.50045548042201,0.92747276314595,1.03056216018252,1.11670113798954,1.5189869901714,1.16924406193438,1.51460264546469,0.460249493211497,0.969876340912871,1.77504796258307,1.0075209822764,0.339121184620975,0.386521706326594,0,0,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,6.43240938192885,0,1.85747171212792,1.44375896333917,0.354920400119532,0.505754070234305,0,0.330881918197182,0.435758888184812,0.237270619111097,0.539325232640658,0.392442930250692,0.38474715694639,4.42893272774789,0,0.8231480226628,2.94017422771084,0,0,0,0,0,0.171567810298526,1.09750285408626,1.1240175325762,0,0.648119116109707,0,1.03993478527958,0,0,0,0.433099343283221,0,0,0,0,0,0,0,0,0.671928512795438,0,0.0895585227028483,0,0,0.492663237895943,0,0,0,0.12624243342638,0,0.381988425558278,0,1.71072446022705,0.308482478109971,0.300343057843917,0,0.336393253036082,0.43596006883328,0.4400297149257,0.387815147273333,0,0.845302752556,1.86156681609409,3.12022310734098,0.771622122786426,0,0.266422179016099,0.714889968290738,1.62786481617433,0,0,1.06617584622764,0,0.301439377059586,0,0.699810938274399,0,0,0,0.718874566474748,2.29723871668228,0,0.434343920002738,1.64381058040307,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.34960640891054,1.00034104211935,0.271265023699736,1.87173775377726,6.78030157429215,3.94256037584837,1.28855556491985,0.902838299183157,2.27407504055985,1.03473071292505,0,0.368738337083406,0.521301686808497,1.37060810223918,1.37257369524342,0,0,0,0.303127571446259,1.66435439510497,1.20956117331872,0.744323423456331,0.61384789315225,3.36792113319688,0.768834895534206,1.53512174720011,2.89537058058494,0,2.92998418225046,1.77561725313127,0.328508624055237,3.63478100428535,3.02146983995894,0.120859449591622,2.40607764363942,0.460404944679482,0.803701137152247,2.54927635209404,2.36023946926963,0,0.231046011313244,0.784349769176855,1.46139224653261,0.105551628892876,0,0.680374821106063,0.863663664408557,0,0.541892875087706,0.501689773854853,0,0,0.447749509444357,0,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0,0.574265537996172,4.55042172225565,3.21367859688319,0.290012154876366,1.07834031980251,1.22802939780904,0.689182862422653,0.107420244868274,1.45016693914229,0.93749290157711,0.534192213880424,0.330569830721956,0.384380134730212,0,0.809262246844399,4.18360994367557,0,0,0.308033580176089,0.532306030317022,0,0,0.143124886741991,0,0,0.762520775695299,0.511795582622668,0.42793898803392,0.318203247925937,2.35484592059769,0.539617372749944,1.64722217841633,1.64937363283961,0.404364963146632,0,0,1.95053495635836,0.974853958525138,0,0.9554993798559,2.2624869112594,2.26016233240486,0,1.99031692572366,0.876901770507525,1.73632660280006,0.655894752046633,0.608731130888112,1.54911749049875,2.53526042279017,0,0.392996164052485,0.35667105148125,0.354761064070598,1.68886108238131,1.97576935775941,0,0.349934720244983,0.0962221127255121,2.68120910214315,0,0.0941438007767792,1.29151611801369,1.68471475667626,2.21715076768338,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0.490080431962063,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.439524537815682,0,0,0,0,0,0.614321404198464,0,0.140669416410513,0.222617410045812,0,0,0.398495976502139,0.276283915531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| ||
|short_description=p3@EHD2 | |short_description=p3@EHD2 | ||
}} | }} |
Latest revision as of 00:31, 19 September 2015
Short description: | p3@EHD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EHD2_5end |
Coexpression cluster: | C764_Olfactory_Mesenchymal_Synoviocyte_Adipocyte_tenocyte_Chondrocyte_Multipotent |
Association with transcript: | -122bp_to_AK026134_5end |
EntrezGene: | EHD2 |
HGNC: | 3243 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.09e-15 | 76 |
somatic stem cell | 1.17e-07 | 433 |
multi fate stem cell | 2.75e-07 | 427 |
stem cell | 3.86e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
integument | 9.10e-09 | 46 |
integumental system | 9.10e-09 | 46 |
surface structure | 2.49e-08 | 99 |
skin of body | 5.31e-07 | 41 |