FFCP PHASE1:Hg19::chr18:21594523..21594539,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=125488 | |EntrezGene=125488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26595 | |HGNC=26595 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N584 | |UniProt=Q8N584 | ||
|association_with_transcript=139bp_to_ENST00000317571,NM_001135993,NM_001243425,uc002kuv.2,uc002kuw.2_5end | |association_with_transcript=139bp_to_ENST00000317571,NM_001135993,NM_001243425,uc002kuv.2,uc002kuw.2_5end | ||
|cluster_id=chr18:21594523..21594539,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_3_at_TTC39C_5end | |description=CAGE_peak_3_at_TTC39C_5end | ||
|id=chr18:21594523..21594539,+ | |id=chr18:21594523..21594539,+ | ||
|ontology_enrichment_celltype=CL:0000791;3.40e-23;18!CL:0000789;3.40e-23;18!CL:0002419;3.40e-23;18!CL:0000542;1.43e-21;53!CL:0000084;1.28e-19;25!CL:0000945;1.83e-15;24!CL:0000625;2.15e-14;11!CL:0000236;2.16e-13;13!CL:0000624;2.23e-09;6!CL:0002087;1.01e-07;104 | |ontology_enrichment_celltype=CL:0000542!4.06e-22!53;CL:0000051!4.06e-22!53;CL:0000838!1.19e-21!52;CL:0002087!6.92e-17!119;CL:0000738!6.12e-15!140;CL:0000037!6.28e-14!172;CL:0000566!6.28e-14!172;CL:0000791!4.54e-13!18;CL:0000789!4.54e-13!18;CL:0002420!4.54e-13!18;CL:0002419!4.54e-13!18;CL:0000790!4.54e-13!18;CL:0000988!2.41e-12!182;CL:0002031!4.80e-12!124;CL:0002032!7.75e-12!165;CL:0000837!7.75e-12!165;CL:0000084!1.70e-11!25;CL:0000827!1.70e-11!25;CL:0000945!1.30e-09!24;CL:0000826!1.30e-09!24;CL:0000625!2.11e-08!11;CL:0000236!2.51e-08!14 | ||
| | |ontology_enrichment_celltype_v019=CL:0000791;3.40e-23;18!CL:0000789;3.40e-23;18!CL:0002419;3.40e-23;18!CL:0000542;1.43e-21;53!CL:0000084;1.28e-19;25!CL:0000945;1.83e-15;24!CL:0000625;2.15e-14;11!CL:0000236;2.16e-13;13!CL:0000624;2.23e-09;6!CL:0002087;1.01e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.38e-38,53;CL:0000051,2.38e-38,53;CL:0000838,1.80e-37,52;CL:0002087,5.16e-26,115;CL:0000738,2.59e-25,136;CL:0000037,4.43e-25,168;CL:0000988,5.00e-24,177;CL:0000791,3.39e-23,18;CL:0000789,3.39e-23,18;CL:0002420,3.39e-23,18;CL:0002419,3.39e-23,18;CL:0000790,3.39e-23,18;CL:0002032,3.12e-21,161;CL:0000837,3.12e-21,161;CL:0002031,1.03e-19,120;CL:0000084,1.64e-19,25;CL:0000827,1.64e-19,25;CL:0000945,1.41e-15,24;CL:0000826,1.41e-15,24;CL:0000625,2.04e-14,11;CL:0000236,2.82e-14,14;CL:0000624,2.30e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000790;3.40e-23;18!CL:0000051;1.43e-21;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;2.94e-14;15!UBERON:0000179;2.94e-14;15!UBERON:0000463;2.94e-14;15!UBERON:0002390;1.18e-09;32!UBERON:0002193;1.66e-07;42 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.41e-09!15;UBERON:0000179!6.41e-09!15;UBERON:0000463!6.41e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.94e-14;15!UBERON:0000179;2.94e-14;15!UBERON:0000463;2.94e-14;15!UBERON:0002390;1.18e-09;32!UBERON:0002193;1.66e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.01e-14,15;UBERON:0000179,5.01e-14,15;UBERON:0000463,5.01e-14,15;UBERON:0002193,4.33e-07,108 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.422863212287913,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.783556884599516,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0,1.46379839637152,0.123121058076788,0.408001382488506,0.313454721478088,0,0.684372125364421,0.376627918784408,1.14620108621927,1.23150884174919,1.18066171970519,1.96682138424452,1.91914699048606,1.23852898652861,0,0.90361775633475,0.369754010166788,2.71135202031056,0.142169232487422,0.293600439334847,1.66198622559563,2.00544447470142,2.82114131930607,0.223915474239924,1.6194683300949,0.77272670290256,0.290796477559129,0,0.242584061187816,0.929716147622738,0.411167888021826,0.309706370895104,0.575384784644301,1.7931249457037,0.709446689665756,0.344745680736619,1.29096936716765,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0.989553900560148,1.59570926097305,0.426224750532694,0.870627715885752,0,0.622822248995575,1.00499466102697,1.0429658368404,0.217188844705117,1.81619850790011,0,0.632924774881769,0,0,0.419317291016752,0.22465726229299,0.450530678524519,0,0.285012743741249,1.19350006319454,0,3.51992488922645,3.27683166757279,4.44754626931777,2.98711155796555,2.40237592221607,1.72425731986345,1.98313461835459,3.81621501814146,5.12291672198504,6.45960908308033,8.02773779062981,0,0.560508562981536,1.31692042387539,18.884137930928,23.1876350022007,21.793758893948,19.226446969928,24.7700922641529,28.8803161498187,19.4826728407911,5.79334375802903,31.5228320998076,33.894685871294,30.0592288779167,7.42929654408916,7.28332346335318,9.37296056240954,8.29050053357545,6.95527405764126,17.6461010162852,18.4603171381902,10.4535523804977,9.51798478659556,19.9274656672999,20.6176467289578,16.6992996732872,12.7426165729639,7.81300144627702,5.70271226669025,9.48623250189969,11.9027548373609,8.74515085866421,7.81364931745256,6.56902397536837,7.66105624253983,8.29064606928873,7.38604459802275,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.0945348171640679,0.443458794925128,0.175669571386252,0.196468613246569,0.728590576585084,1.11235332835329,1.62273696827342,2.08955684759121,0.930705723632056,2.38490624305342,1.71598473234038,3.71457501329565,0,0,0,0,0,0,0.208994966536811,0,1.06729878806013,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0.183201743930407,1.31780417436063,0,0.436094052142534,0,0.25326102332916,0.397227542439656,0.286836620748814,0.709336764396714,0.560677600142307,0,0,0.622422070799533,0.269421344139376,0,0,0,0,0,0,0,0.469737994575059,0.485618833104395,0,0,0.245668634623536,0.413303124703062,1.18800285728205,0.247266929278557,0.910161361938026,1.43723628363248,0.168336113954066,0.375355559615893,0.277064115484183,0,0.612975591598039,0.901428353439581,0.113432183160021,0.717558542755448,0,0.423863802319124,0,0.206105058476878,1.28820270022815,0.37223371266318,0,0.0974370051611986,0.504867548488229,0.736399189138395,0.646584227275248,0.355009592516614,0,0.67824236924195,0.193260853163297,0.545492241181669,0.286804595389004,0.365921118388786,0.662648841607426,0.348581828608555,0.10366105501537,0.252320850875628,0,1.56449532329816,0,0,0,0.721879481669586,0.591534000199219,1.34867752062481,1.44606617930089,1.43382164552112,1.08939722046203,0.237270619111097,1.61797569792197,1.37355025587742,0,0,1.40241773803446,0,0,0,0,0.590789906681404,5.29755719297581,0.122988438543114,0.343135620597051,0.439001141634502,0,0.201057944823262,0.462942225792648,0.651616610620649,0,0,0.231860809950154,0.234817388471643,0,0.462985512576611,0.190254152234598,2.37061319387782,1.71697232418975,0.246217006087397,0.468008530278475,0.148631162288728,0,0.16798212819886,0,0,0.290633938513962,0.383382679165211,0,0.088048434013226,0,0.288239906833923,0,0,0,0,0,0.616964956219941,0,0.285826432630578,0.224262168690721,0.43596006883328,0.2933531432838,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,1.2162378064119,0,0,0,0,1.42636905040718,0.723906533337896,0.410952645100767,0.358121926479791,5.26800176769578,8.47232268868287,8.19384784466166,7.44389610422541,0.508189248444927,2.60279707715243,0,0.670065061337395,0.637938751653163,0,0,0.414415513436035,0.36807447515742,0.500170521059677,0,1.45579603071565,1.07057393278297,1.41932173530541,0.702848489956279,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0.391602314925481,0,6.82334486205528,5.1771408196468,8.53820462427555,0,1.66435439510497,0,0.248107807818777,0.767309866440312,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0.232420756919918,0.846016147141356,0,0.184161977871793,0.229628896329213,0,0.524497659837696,0,0.308061348417659,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0.328014645699706,0.976135183992909,0.103041011647722,1.19040304263846,0.495056999523528,0,0,0,0.193341436584244,0.462145851343933,0.767518373630648,0.275673144969061,0.429680979473094,0.580066775656914,0.511359764496605,0.2670961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| ||
|short_description=p3@TTC39C | |short_description=p3@TTC39C | ||
}} | }} |
Latest revision as of 00:33, 19 September 2015
Short description: | p3@TTC39C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TTC39C_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 139bp_to_ENST00000317571, NM_001135993, NM_001243425, uc002kuv.2, uc002kuw.2_5end |
EntrezGene: | TTC39C |
HGNC: | 26595 |
UniProt: | Q8N584 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.38e-38 | 53 |
common lymphoid progenitor | 2.38e-38 | 53 |
lymphoid lineage restricted progenitor cell | 1.80e-37 | 52 |
nongranular leukocyte | 5.16e-26 | 115 |
leukocyte | 2.59e-25 | 136 |
hematopoietic stem cell | 4.43e-25 | 168 |
hematopoietic cell | 5.00e-24 | 177 |
mature alpha-beta T cell | 3.39e-23 | 18 |
alpha-beta T cell | 3.39e-23 | 18 |
immature T cell | 3.39e-23 | 18 |
mature T cell | 3.39e-23 | 18 |
immature alpha-beta T cell | 3.39e-23 | 18 |
hematopoietic oligopotent progenitor cell | 3.12e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.12e-21 | 161 |
hematopoietic lineage restricted progenitor cell | 1.03e-19 | 120 |
T cell | 1.64e-19 | 25 |
pro-T cell | 1.64e-19 | 25 |
lymphocyte of B lineage | 1.41e-15 | 24 |
pro-B cell | 1.41e-15 | 24 |
CD8-positive, alpha-beta T cell | 2.04e-14 | 11 |
B cell | 2.82e-14 | 14 |
CD4-positive, alpha-beta T cell | 2.30e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 5.01e-14 | 15 |
haemolymphatic fluid | 5.01e-14 | 15 |
organism substance | 5.01e-14 | 15 |
hemolymphoid system | 4.33e-07 | 108 |