FFCP PHASE1:Hg19::chr3:52739588..52739621,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:52739588..52739621,-
|short_description=p2@GLT8D1
|description=CAGE_peak_2_at_GLT8D1_5end
|association_with_transcript=48bp_to_ENST00000497953_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55830 | |EntrezGene=55830 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24870 | |HGNC=24870 | ||
|TSSclassifier=strong | |||
|UniProt=C9JY96 | |UniProt=C9JY96 | ||
|association_with_transcript=48bp_to_ENST00000497953_5end | |||
|cluster_id=chr3:52739588..52739621,- | |||
|coexpression_cluster_id=C811 | |||
|description=CAGE_peak_2_at_GLT8D1_5end | |||
|id=chr3:52739588..52739621,- | |||
|ontology_enrichment_celltype=CL:0000055!6.45e-32!180;CL:0000057!6.57e-20!75;CL:0000680!1.32e-16!57;CL:0000056!1.32e-16!57;CL:0000355!1.32e-16!57;CL:0000187!1.36e-15!54;CL:0000222!1.37e-14!119;CL:0000183!2.31e-13!59;CL:0000192!1.10e-12!42;CL:0000514!1.10e-12!42;CL:0000393!6.02e-12!60;CL:0000211!6.02e-12!60;CL:0000359!3.28e-11!32;CL:0002371!8.78e-11!591;CL:0002620!3.28e-10!23;CL:0000144!1.57e-09!625;CL:0000220!4.16e-09!246;CL:0002321!8.93e-09!248;CL:0002334!2.18e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.57e-10;32!CL:0002620;2.91e-10;23!CL:0000134;8.46e-10;55!CL:0000192;1.54e-09;43!CL:0000187;3.06e-09;55!CL:0000723;1.17e-08;61!CL:0000048;1.71e-08;58!CL:0000057;7.22e-08;73!CL:0002320;1.76e-07;188!CL:0002334;1.87e-07;12!CL:0000393;2.27e-07;61!CL:0000211;2.27e-07;61!CL:0000349;5.87e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.72e-20,76;CL:0000680,4.82e-17,58;CL:0000056,4.82e-17,58;CL:0000355,4.82e-17,58;CL:0000187,5.00e-16,55;CL:0000222,6.42e-15,121;CL:0000192,4.16e-13,43;CL:0000514,4.16e-13,43;CL:0000393,2.50e-12,61;CL:0000211,2.50e-12,61;CL:0000359,3.18e-11,32;CL:0002620,3.19e-10,23;CL:0002321,7.05e-09,250;CL:0002334,2.14e-07,12;CL:0000349,6.97e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000514;1.54e-09;43!CL:0000355;2.94e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.88e-22!83;UBERON:0002329!2.88e-22!83;UBERON:0003077!2.88e-22!83;UBERON:0003059!2.88e-22!83;UBERON:0007282!2.88e-22!83;UBERON:0009618!2.88e-22!83;UBERON:0007285!2.88e-22!83;UBERON:0004290!5.09e-18!70;UBERON:0000486!5.81e-17!82;UBERON:0004872!6.24e-16!84;UBERON:0001134!1.21e-15!61;UBERON:0002036!1.21e-15!61;UBERON:0003082!1.21e-15!61;UBERON:0002385!3.48e-15!63;UBERON:0001015!3.48e-15!63;UBERON:0000383!3.48e-15!63;UBERON:0002049!8.04e-14!79;UBERON:0007798!8.04e-14!79;UBERON:0005256!2.66e-13!143;UBERON:0000055!1.68e-12!69;UBERON:0001981!5.66e-12!60;UBERON:0007500!5.66e-12!60;UBERON:0004537!5.66e-12!60;UBERON:0006965!5.66e-12!60;UBERON:0001637!5.86e-12!42;UBERON:0003509!5.86e-12!42;UBERON:0004572!5.86e-12!42;UBERON:0003102!3.41e-11!95;UBERON:0002100!1.25e-10!216;UBERON:0004535!2.13e-10!110;UBERON:0002199!2.43e-10!45;UBERON:0002416!2.43e-10!45;UBERON:0000490!2.53e-10!138;UBERON:0004573!6.89e-10!33;UBERON:0004571!6.89e-10!33;UBERON:0001009!9.77e-10!113;UBERON:0000475!4.85e-09!365;UBERON:0002097!7.60e-09!40;UBERON:0003914!4.49e-08!118;UBERON:0003104!3.67e-07!238;UBERON:0009142!3.67e-07!238;UBERON:0004923!4.00e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.11e-09;33!UBERON:0004571;5.11e-09;33!UBERON:0001637;1.14e-08;42!UBERON:0003509;1.14e-08;42!UBERON:0004572;1.14e-08;42!UBERON:0002199;1.00e-07;46!UBERON:0002416;1.00e-07;46!UBERON:0002097;2.01e-07;41!UBERON:0002384;3.64e-07;198!UBERON:0007500;4.07e-07;56!UBERON:0001981;4.07e-07;56!UBERON:0004537;4.07e-07;56!UBERON:0002385;4.46e-07;31!UBERON:0001015;4.46e-07;31!UBERON:0000383;4.46e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,8.73e-19,73;UBERON:0002329,1.85e-18,71;UBERON:0003059,1.85e-18,71;UBERON:0007282,1.85e-18,71;UBERON:0004290,1.85e-18,71;UBERON:0009618,1.85e-18,71;UBERON:0003077,3.13e-18,72;UBERON:0007285,3.13e-18,72;UBERON:0000486,2.20e-17,83;UBERON:0007503,2.89e-16,78;UBERON:0001134,4.52e-16,62;UBERON:0002036,4.52e-16,62;UBERON:0003082,4.52e-16,62;UBERON:0002385,1.31e-15,64;UBERON:0001015,1.31e-15,64;UBERON:0000383,1.31e-15,64;UBERON:0004872,1.87e-15,83;UBERON:0002049,2.32e-13,78;UBERON:0007798,2.32e-13,78;UBERON:0000490,1.64e-12,148;UBERON:0003102,1.73e-12,99;UBERON:0000055,4.84e-12,68;UBERON:0001637,5.67e-12,42;UBERON:0003509,5.67e-12,42;UBERON:0004572,5.67e-12,42;UBERON:0007500,1.68e-11,59;UBERON:0001981,1.68e-11,59;UBERON:0004537,1.68e-11,59;UBERON:0006965,1.68e-11,59;UBERON:0005256,2.67e-11,122;UBERON:0002199,8.46e-11,46;UBERON:0002416,8.46e-11,46;UBERON:0003104,8.77e-11,160;UBERON:0009142,8.77e-11,160;UBERON:0004535,4.12e-10,109;UBERON:0004573,6.70e-10,33;UBERON:0004571,6.70e-10,33;UBERON:0001009,1.85e-09,112;UBERON:0002097,2.73e-09,41;UBERON:0004923,2.50e-08,66;UBERON:0002100,8.25e-08,199;UBERON:0003914,1.07e-07,117 | |||
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| ||
|short_description=p2@GLT8D1 | |||
}} | }} |
Latest revision as of 00:46, 19 September 2015
Short description: | p2@GLT8D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GLT8D1_5end |
Coexpression cluster: | C811_Smooth_Fibroblast_Preadipocyte_Chondrocyte_hepatic_basal_Adipocyte |
Association with transcript: | 48bp_to_ENST00000497953_5end |
EntrezGene: | GLT8D1 |
HGNC: | 24870 |
UniProt: | C9JY96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.72e-20 | 76 |
muscle precursor cell | 4.82e-17 | 58 |
myoblast | 4.82e-17 | 58 |
multi-potent skeletal muscle stem cell | 4.82e-17 | 58 |
muscle cell | 5.00e-16 | 55 |
mesodermal cell | 6.42e-15 | 121 |
smooth muscle cell | 4.16e-13 | 43 |
smooth muscle myoblast | 4.16e-13 | 43 |
electrically responsive cell | 2.50e-12 | 61 |
electrically active cell | 2.50e-12 | 61 |
vascular associated smooth muscle cell | 3.18e-11 | 32 |
skin fibroblast | 3.19e-10 | 23 |
embryonic cell | 7.05e-09 | 250 |
preadipocyte | 2.14e-07 | 12 |
extraembryonic cell | 6.97e-07 | 19 |