FFCP PHASE1:Hg19::chr5:82969397..82969400,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1404 | |EntrezGene=1404 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2380 | |HGNC=2380 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_uc003kim.2_5end | |||
|cluster_id=chr5:82969397..82969400,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_16_at_HAPLN1_5end | |||
|id=chr5:82969397..82969400,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.42e-195;1!UBERON:0004872;1.78e-29;7!UBERON:0005795;3.81e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.41e-36!57;UBERON:0005068!1.41e-36!57;UBERON:0006241!1.41e-36!57;UBERON:0007135!1.41e-36!57;UBERON:0001869!1.28e-32!32;UBERON:0002616!5.95e-31!59;UBERON:0002020!9.79e-31!34;UBERON:0003528!9.79e-31!34;UBERON:0001893!1.22e-30!34;UBERON:0001950!1.96e-29!20;UBERON:0002619!9.13e-27!22;UBERON:0002791!1.47e-26!33;UBERON:0000955!1.01e-25!69;UBERON:0006238!1.01e-25!69;UBERON:0002780!3.35e-25!41;UBERON:0001890!3.35e-25!41;UBERON:0006240!3.35e-25!41;UBERON:0003080!1.44e-24!42;UBERON:0001017!2.45e-24!82;UBERON:0000956!1.56e-23!25;UBERON:0000203!1.56e-23!25;UBERON:0003075!2.15e-23!86;UBERON:0007284!2.15e-23!86;UBERON:0005743!4.29e-23!86;UBERON:0002346!3.11e-22!90;UBERON:0007023!1.13e-21!115;UBERON:0000200!1.23e-21!6;UBERON:0000073!1.13e-20!94;UBERON:0001016!1.13e-20!94;UBERON:0003056!2.05e-16!61;UBERON:0002298!5.10e-16!8;UBERON:0000033!2.47e-15!123;UBERON:0001872!3.66e-15!5;UBERON:0000153!1.72e-14!129;UBERON:0007811!1.72e-14!129;UBERON:0003076!3.40e-13!15;UBERON:0003057!3.40e-13!15;UBERON:0002771!6.73e-12!3;UBERON:0000988!1.10e-11!3;UBERON:0001896!2.57e-11!3;UBERON:0005290!2.57e-11!3;UBERON:0010096!2.57e-11!3;UBERON:0004733!9.50e-11!12;UBERON:0002028!9.50e-11!12;UBERON:0007277!9.50e-11!12;UBERON:0004121!2.53e-10!169;UBERON:0000025!4.83e-10!194;UBERON:0000924!5.10e-10!173;UBERON:0006601!5.10e-10!173;UBERON:0004732!6.18e-10!13;UBERON:0001871!1.26e-09!7;UBERON:0003112!1.56e-09!1;UBERON:0000032!1.56e-09!1;UBERON:0005253!1.56e-09!1;UBERON:0003128!1.56e-09!1;UBERON:0002241!1.56e-09!1;UBERON:0001703!1.56e-09!1;UBERON:0004761!1.56e-09!1;UBERON:0009617!1.56e-09!1;UBERON:0001874!1.69e-09!1;UBERON:0002581!2.16e-09!1;UBERON:0001882!2.55e-09!1;UBERON:0005403!2.55e-09!1;UBERON:0002902!3.83e-09!1;UBERON:0009899!3.83e-09!1;UBERON:0007190!4.50e-09!1;UBERON:0000369!5.30e-09!4;UBERON:0002435!5.30e-09!4;UBERON:0000204!5.30e-09!4;UBERON:0010082!5.30e-09!4;UBERON:0002308!1.34e-08!9;UBERON:0000125!1.34e-08!9;UBERON:0000064!1.67e-08!219;UBERON:0004111!1.86e-07!241;UBERON:0002021!2.51e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;3.10e-50;4!UBERON:0000478;1.01e-09;24!UBERON:0000077;8.32e-09;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,3.10e-50,4;UBERON:0004340,3.10e-50,4;UBERON:0003124,1.78e-29,7;UBERON:0005631,1.43e-15,14;UBERON:0000158,1.43e-15,14;UBERON:0000995,6.74e-11,21;UBERON:0005795,1.80e-10,22;UBERON:0003975,1.80e-10,22;UBERON:0000478,1.01e-09,24;UBERON:0004175,2.15e-09,25;UBERON:0000077,2.67e-08,29;UBERON:0003134,8.21e-07,37;UBERON:0000474,8.21e-07,37 | |||
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|short_description=p16@HAPLN1 | |||
}} | }} |
Latest revision as of 01:07, 19 September 2015
Short description: | p16@HAPLN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_HAPLN1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 12bp_to_uc003kim.2_5end |
EntrezGene: | HAPLN1 |
HGNC: | 2380 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placenta | 3.10e-50 | 4 |
allantois | 3.10e-50 | 4 |
chorion | 1.78e-29 | 7 |
extraembryonic membrane | 1.43e-15 | 14 |
membranous layer | 1.43e-15 | 14 |
uterus | 6.74e-11 | 21 |
embryonic uterus | 1.80e-10 | 22 |
internal female genitalia | 1.80e-10 | 22 |
extraembryonic structure | 1.01e-09 | 24 |
internal genitalia | 2.15e-09 | 25 |
mixed endoderm/mesoderm-derived structure | 2.67e-08 | 29 |
female reproductive organ | 8.21e-07 | 37 |
female reproductive system | 8.21e-07 | 37 |