FFCP PHASE1:Hg19::chr7:55583693..55583705,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81552 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34518 | |||
|TSSclassifier=strong | |||
|UniProt=C9JIM1 | |||
|association_with_transcript=64bp_to_ENST00000453256_5end | |||
|cluster_id=chr7:55583693..55583705,- | |||
|description=CAGE_peak_10_at_VOPP1_5end | |||
|id=chr7:55583693..55583705,- | |||
|ontology_enrichment_celltype=CL:0000945!2.28e-41!24;CL:0000826!2.28e-41!24;CL:0000236!1.65e-25!14;CL:0000542!3.40e-22!53;CL:0000051!3.40e-22!53;CL:0000838!2.19e-20!52;CL:0000738!1.65e-10!140;CL:0002087!2.61e-09!119;CL:0000037!1.05e-08!172;CL:0000566!1.05e-08!172;CL:0000988!7.84e-08!182;CL:0002032!8.60e-08!165;CL:0000837!8.60e-08!165;CL:0002031!9.74e-08!124;CL:0000785!4.87e-07!2;CL:0000955!4.87e-07!2;CL:0000818!4.87e-07!2;CL:0000954!4.87e-07!2;CL:0000816!4.87e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;5.10e-38;13!CL:0000945;1.31e-29;24!CL:0000542;7.57e-14;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.24e-35,14;CL:0000945,1.25e-29,24;CL:0000826,1.25e-29,24;CL:0000542,3.91e-18,53;CL:0000051,3.91e-18,53;CL:0000838,1.08e-13,52;CL:0002087,3.76e-08,115;CL:0000738,7.56e-07,136 | |||
|ontology_enrichment_development_v019=UBERON:0001045;6.31e-21;1!CL:0000051;7.57e-14;53 | |||
|ontology_enrichment_disease=DOID:0060058!7.09e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:630;2.08e-21;1!DOID:0050177;2.08e-21;1!DOID:0050427;2.08e-21;1!DOID:12603;3.12e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.30e-21,1;DOID:0050177,2.30e-21,1;DOID:0050427,2.30e-21,1;DOID:12603,3.45e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.69e-12!115;UBERON:0004177!2.40e-10!7;UBERON:0002106!7.24e-10!3;UBERON:0004854!7.24e-10!3;UBERON:0009034!7.24e-10!3;UBERON:0002095!7.24e-10!3;UBERON:0004782!7.24e-10!3;UBERON:0003281!7.24e-10!3;UBERON:0009664!7.24e-10!3;UBERON:0002296!7.24e-10!3;UBERON:0005602!7.24e-10!3;UBERON:0001179!7.24e-10!3;UBERON:0006293!7.24e-10!3;UBERON:0003296!3.41e-07!4;UBERON:0010133!3.41e-07!4;UBERON:0001905!5.33e-07!2;UBERON:0002757!5.33e-07!2;UBERON:0010134!5.33e-07!2;UBERON:0002784!5.33e-07!2;UBERON:0005408!5.33e-07!2;UBERON:0001899!5.33e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;6.31e-21;1!UBERON:0001153;6.31e-21;1!UBERON:0009854;6.31e-21;1!UBERON:0002106;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,9.43e-21,1;UBERON:0001153,9.43e-21,1;UBERON:0001045,9.43e-21,1;UBERON:0002106,6.78e-08,3;UBERON:0004854,6.78e-08,3;UBERON:0009034,6.78e-08,3;UBERON:0002095,6.78e-08,3;UBERON:0004782,6.78e-08,3;UBERON:0003281,6.78e-08,3;UBERON:0009664,6.78e-08,3;UBERON:0002296,6.78e-08,3;UBERON:0005602,6.78e-08,3;UBERON:0001179,6.78e-08,3;UBERON:0006293,6.78e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.246301768349837,0.314843125254717,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0.447830948479849,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79981222306614,2.73069305631066,0,0.426730222566507,1.60158394814405,1.14950487990897,1.32208974556972,0,0.569212969109448,0.587237189370939,0.764546456250458,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0.821127996921047,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0,0,0,2.41544127663434,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,6.32357222073422,0.487170393523584,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0,0.981392365535065,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0,0.345701962667338,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,1.50374268767766,0.580120991762195,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0.124149428591716,0,0,0,0.435433495793923,0,0.606168477131288,0.286888821570705,0,0,0,0,0,0,0,0,0,0.201273793591026,6.09080135376143 | |||
|short_description=p10@VOPP1 | |||
}} |
Latest revision as of 01:29, 19 September 2015
Short description: | p10@VOPP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_VOPP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 64bp_to_ENST00000453256_5end |
EntrezGene: | VOPP1 |
HGNC: | 34518 |
UniProt: | C9JIM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.24e-35 | 14 |
lymphocyte of B lineage | 1.25e-29 | 24 |
pro-B cell | 1.25e-29 | 24 |
lymphocyte | 3.91e-18 | 53 |
common lymphoid progenitor | 3.91e-18 | 53 |
lymphoid lineage restricted progenitor cell | 1.08e-13 | 52 |
nongranular leukocyte | 3.76e-08 | 115 |
leukocyte | 7.56e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 9.43e-21 | 1 |
caecum | 9.43e-21 | 1 |
midgut | 9.43e-21 | 1 |
spleen | 6.78e-08 | 3 |
gastrointestinal system mesentery | 6.78e-08 | 3 |
stomach region | 6.78e-08 | 3 |
mesentery | 6.78e-08 | 3 |
gastrointestinal system serosa | 6.78e-08 | 3 |
mesentery of stomach | 6.78e-08 | 3 |
gut mesentery | 6.78e-08 | 3 |
dorsal mesentery | 6.78e-08 | 3 |
dorsal mesogastrium | 6.78e-08 | 3 |
peritoneal cavity | 6.78e-08 | 3 |
spleen primordium | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.30e-21 | 1 |
monogenic disease | 2.30e-21 | 1 |
xeroderma pigmentosum | 2.30e-21 | 1 |
acute leukemia | 3.45e-21 | 1 |