FFCP PHASE1:Hg19::chr2:189876360..189876377,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q9H394 | |UniProt=Q9H394 | ||
|association_with_transcript=-251bp_to_AF130082_5end | |association_with_transcript=-251bp_to_AF130082_5end | ||
|cluster_id=chr2:189876360..189876377,+ | |||
|coexpression_cluster_id=C292 | |coexpression_cluster_id=C292 | ||
|description=CAGE_peak_4_at_AF130082_5end | |description=CAGE_peak_4_at_AF130082_5end | ||
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|ontology_enrichment_celltype=CL:0000055!4.77e-19!180;CL:0000057!6.59e-15!75;CL:0000187!2.41e-10!54;CL:0000183!6.05e-10!59;CL:0000680!6.91e-10!57;CL:0000056!6.91e-10!57;CL:0000355!6.91e-10!57;CL:0000048!4.78e-09!430;CL:0000723!2.16e-08!436;CL:0000393!3.14e-08!60;CL:0000211!3.14e-08!60;CL:0000034!4.26e-08!444;CL:0000136!1.55e-07!15;CL:0002334!3.68e-07!12;CL:0002570!7.80e-07!8;CL:0002494!9.85e-07!16 | |ontology_enrichment_celltype=CL:0000055!4.77e-19!180;CL:0000057!6.59e-15!75;CL:0000187!2.41e-10!54;CL:0000183!6.05e-10!59;CL:0000680!6.91e-10!57;CL:0000056!6.91e-10!57;CL:0000355!6.91e-10!57;CL:0000048!4.78e-09!430;CL:0000723!2.16e-08!436;CL:0000393!3.14e-08!60;CL:0000211!3.14e-08!60;CL:0000034!4.26e-08!444;CL:0000136!1.55e-07!15;CL:0002334!3.68e-07!12;CL:0002570!7.80e-07!8;CL:0002494!9.85e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000134;3.50e-16;55!CL:0000048;3.55e-14;58!CL:0000723;1.24e-13;61!CL:0000349;1.85e-12;19!CL:0000034;5.56e-10;69!CL:0002569;3.55e-08;6!CL:0000136;4.31e-08;13!CL:0002570;9.04e-08;8!CL:0002537;7.74e-07;5 | |ontology_enrichment_celltype_v019=CL:0000134;3.50e-16;55!CL:0000048;3.55e-14;58!CL:0000723;1.24e-13;61!CL:0000349;1.85e-12;19!CL:0000034;5.56e-10;69!CL:0002569;3.55e-08;6!CL:0000136;4.31e-08;13!CL:0002570;9.04e-08;8!CL:0002537;7.74e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.01e-12,19;CL:0000136,2.63e-10,15;CL:0000048,1.70e-09,427;CL:0000723,5.04e-09,433;CL:0000034,2.01e-08,441;CL:0002320,3.00e-08,361;CL:0002569,4.72e-08,6;CL:0000057,5.11e-08,76;CL:0002570,7.97e-08,8;CL:0000134,3.45e-07,354;CL:0002537,6.52e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;1.45e-08;14 | |ontology_enrichment_disease_v019=DOID:2394;1.45e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.88e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004290!7.76e-12!70;UBERON:0000914!1.14e-11!83;UBERON:0002329!1.14e-11!83;UBERON:0003077!1.14e-11!83;UBERON:0003059!1.14e-11!83;UBERON:0007282!1.14e-11!83;UBERON:0009618!1.14e-11!83;UBERON:0007285!1.14e-11!83;UBERON:0002385!1.84e-11!63;UBERON:0001015!1.84e-11!63;UBERON:0000383!1.84e-11!63;UBERON:0001134!5.22e-11!61;UBERON:0002036!5.22e-11!61;UBERON:0003082!5.22e-11!61;UBERON:0000478!1.94e-10!24;UBERON:0000486!2.20e-09!82;UBERON:0001013!8.44e-09!14;UBERON:0005256!4.14e-08!143;UBERON:0004923!4.76e-08!57;UBERON:0005631!6.04e-08!14;UBERON:0000158!6.04e-08!14;UBERON:0002100!1.24e-07!216;UBERON:0000948!4.55e-07!24;UBERON:0005498!4.55e-07!24;UBERON:0004140!4.55e-07!24;UBERON:0009881!4.55e-07!24;UBERON:0004141!4.55e-07!24;UBERON:0003084!4.55e-07!24;UBERON:0007005!4.55e-07!24;UBERON:0004139!4.55e-07!24;UBERON:0004291!4.55e-07!24;UBERON:0004872!6.00e-07!84;UBERON:0004871!9.56e-07!8 | |ontology_enrichment_uberon=UBERON:0004290!7.76e-12!70;UBERON:0000914!1.14e-11!83;UBERON:0002329!1.14e-11!83;UBERON:0003077!1.14e-11!83;UBERON:0003059!1.14e-11!83;UBERON:0007282!1.14e-11!83;UBERON:0009618!1.14e-11!83;UBERON:0007285!1.14e-11!83;UBERON:0002385!1.84e-11!63;UBERON:0001015!1.84e-11!63;UBERON:0000383!1.84e-11!63;UBERON:0001134!5.22e-11!61;UBERON:0002036!5.22e-11!61;UBERON:0003082!5.22e-11!61;UBERON:0000478!1.94e-10!24;UBERON:0000486!2.20e-09!82;UBERON:0001013!8.44e-09!14;UBERON:0005256!4.14e-08!143;UBERON:0004923!4.76e-08!57;UBERON:0005631!6.04e-08!14;UBERON:0000158!6.04e-08!14;UBERON:0002100!1.24e-07!216;UBERON:0000948!4.55e-07!24;UBERON:0005498!4.55e-07!24;UBERON:0004140!4.55e-07!24;UBERON:0009881!4.55e-07!24;UBERON:0004141!4.55e-07!24;UBERON:0003084!4.55e-07!24;UBERON:0007005!4.55e-07!24;UBERON:0004139!4.55e-07!24;UBERON:0004291!4.55e-07!24;UBERON:0004872!6.00e-07!84;UBERON:0004871!9.56e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;8.84e-11;24!UBERON:0001013;4.29e-10;14!UBERON:0003104;2.60e-09;7!UBERON:0009142;2.60e-09;7!UBERON:0003688;3.82e-09;6!UBERON:0002358;3.82e-09;6!UBERON:0003684;3.82e-09;6!UBERON:0001178;3.82e-09;6!UBERON:0003422;3.55e-08;6!UBERON:0004457;1.83e-07;9!UBERON:0000042;1.83e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0000478;8.84e-11;24!UBERON:0001013;4.29e-10;14!UBERON:0003104;2.60e-09;7!UBERON:0009142;2.60e-09;7!UBERON:0003688;3.82e-09;6!UBERON:0002358;3.82e-09;6!UBERON:0003684;3.82e-09;6!UBERON:0001178;3.82e-09;6!UBERON:0003422;3.55e-08;6!UBERON:0004457;1.83e-07;9!UBERON:0000042;1.83e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,5.36e-11,24;UBERON:0001013,5.79e-10,14;UBERON:0003688,3.85e-09,6;UBERON:0002358,3.85e-09,6;UBERON:0003684,3.85e-09,6;UBERON:0001178,3.85e-09,6;UBERON:0002384,8.17e-09,371;UBERON:0003422,4.72e-08,6;UBERON:0004871,8.84e-08,8 | |||
|phase1_expression=2.54349730978779,5.78071414505655,6.20199378022273,4.00293193412522,2.68176656656373,4.36169262050184,7.59899634504932,1.26343974685366,1.04474251279935,0,0,0.655324116390517,1.58260186937072,1.60896258848061,0.662794751455832,0,0,0.730310090387373,1.46379839637152,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,3.35350429851818,1.40648818027883,0,1.00267582127178,3.18662341713812,0.795285947051099,12.1658717575659,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46063537203914,1.01304409331664,1.58891016975863,4.87622255272983,1.77334191099179,3.36406560085384,2.1349799145941,0.98667019366864,0.933633106199299,1.34710672069688,0.980771418680752,0.756787138224657,4.60940739583999,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0.280901613404497,0.408308342509787,0,0,2.37600571456411,1.23633464639278,0,0,0.168336113954066,0,0,0,0.30648779579902,1.50238058906597,1.70148274740032,0,1.2813443329114,1.69545520927649,0.600182192168805,0.309157587715317,0.772921620136887,1.11670113798954,1.18143432568886,0.194874010322397,1.26216887122057,1.01254888506529,0.80823028409406,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0,0,0.232387885739037,0.207322110030741,0,0,1.56449532329816,2.57296375277154,0,1.39310378409594,2.16563844500876,0,0,0.241011029883482,0,0,0,0,0,0.38474715694639,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,2.19761916788222,3.57656445851882,0.845302752556,1.59562869950922,2.08014873822732,0,0,0,4.71827379071887,15.7360265563518,1.64648067356154,1.30294473717494,7.10783897485092,3.16780749173372,1.80863626235752,0,1.49959486773086,0,0,0,1.4377491329495,1.14861935834114,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,2.00068208423871,0.271265023699736,8.7347761842939,3.56857977594324,1.73472656537328,1.63997980989798,0.601892199455438,4.5481500811197,0,0,0.368738337083406,0.173767228936166,0.195801157462741,2.05886054286514,0,0,0,0.303127571446259,1.66435439510497,1.81434175997808,2.72918588600655,2.76231551918512,6.17452207752762,3.07533958213682,1.53512174720011,6.4341568457443,0,0.616838775210622,1.42049380250502,0.410635780069046,0.519254429183621,0.581051892299796,0,0,0,2.98517565227978,1.63882051206045,1.04899531967539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,3.21367859688319,0.193341436584244,0.462145851343933,0.460511024178389,0.137836572484531,1.6113036730241,1.16013355131383,0.255679882248303,2.75999310504886,0,0,0,0,0.464845549297286,1.88887408098384,0.6970372701606,0.616067160352178,0,0,0.18532421910392,0.286249773483982,1.86079184679834,0.632758849437452,2.66882271493355,0,3.85145089230528,0.318203247925937,0,3.59744915166629,4.66712950551293,3.29874726567922,0.202182481573316,0,0,0,0.974853958525138,0,0.682499557039929,4.80778468642623,2.26016233240486,0.551365343546124,0,0,0,2.62357900818653,0.202910376962704,0.30982349809975,0,0.860468113224309,2.45622602532803,0.35667105148125,0,0.422215270595328,1.97576935775941,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,1.90995587790152,7.12715233998333,1.22864280839693,0,0,0,0,0,1.39473591775749,0,0,0,0,1.86623752597084,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38510465306835,1.25336261431701,0,0,0,0.957003479195758,1.74035427463538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4441205797345,0,0,0,0,20.0644411824697,0,0,0,0,0.789168805698781,8.46935012340647,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.0969890164884194,0,5.64951851951331,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.407712618220842,0.836822770498666,0,0.288950589901519,0,0,0,0.859530882839914,0,0.279282401272254,0.229160424011684,0,0,0,0,0.604651252380536,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0.326587360109409,0,0,4.08931252285012,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64180283175561,1.8697064787778,1.10961172300523,0.568209015825267,4.0250864280412,7.11848977277229,0,4.99062048418689,2.79786961049005,0.73927574994817,0.955780602982214,0,1.08684069813382,2.07353103920428,3.19010057469594,2.08698024724694,7.66313805885814,7.61610424337591,1.22061219961398,2.00033525122815,1.50374779859484,0,2.3885753321917,0.400027764663154,6.18112269329027,3.36749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.636008701306837,0,0,2.46873160583479,1.53122738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| ||
|short_description=p4@AF130082 | |short_description=p4@AF130082 | ||
}} | }} |
Latest revision as of 01:38, 19 September 2015
Short description: | p4@AF130082 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AF130082_5end |
Coexpression cluster: | C292_Mesenchymal_skin_umbilical_Adipocyte_mesenchymal_Chondrocyte_skeletal |
Association with transcript: | -251bp_to_AF130082_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.01e-12 | 19 |
fat cell | 2.63e-10 | 15 |
multi fate stem cell | 1.70e-09 | 427 |
somatic stem cell | 5.04e-09 | 433 |
stem cell | 2.01e-08 | 441 |
connective tissue cell | 3.00e-08 | 361 |
mesenchymal stem cell of umbilical cord | 4.72e-08 | 6 |
fibroblast | 5.11e-08 | 76 |
mesenchymal stem cell of adipose | 7.97e-08 | 8 |
mesenchymal cell | 3.45e-07 | 354 |
amnion mesenchymal stem cell | 6.52e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 5.36e-11 | 24 |
adipose tissue | 5.79e-10 | 14 |
omentum | 3.85e-09 | 6 |
peritoneum | 3.85e-09 | 6 |
abdominal cavity | 3.85e-09 | 6 |
visceral peritoneum | 3.85e-09 | 6 |
connective tissue | 8.17e-09 | 371 |
mesenchyme of umbilical cord | 4.72e-08 | 6 |
somatic layer of lateral plate mesoderm | 8.84e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.88e-08 | 14 |