FFCP PHASE1:Hg19::chr18:24129367..24129440,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284252 | |EntrezGene=284252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18249 | |HGNC=18249 | ||
|TSSclassifier=strong | |||
|UniProt=Q719H9 | |UniProt=Q719H9 | ||
|association_with_transcript=0bp_to_ENST00000408011,NM_001136205,uc002kvw.2_5end | |association_with_transcript=0bp_to_ENST00000408011,NM_001136205,uc002kvw.2_5end | ||
|cluster_id=chr18:24129367..24129440,- | |||
|description=CAGE_peak_3_at_KCTD1_5end | |description=CAGE_peak_3_at_KCTD1_5end | ||
|id=chr18:24129367..24129440,- | |id=chr18:24129367..24129440,- | ||
|ontology_enrichment_celltype=CL:0000066!1.03e-26!254;CL:0002321!8.03e-21!248;CL:0000220!1.53e-20!246;CL:0000076!1.07e-10!62;CL:0002076!3.12e-10!43;CL:0000221!8.07e-08!71;CL:0000223!3.10e-07!59;CL:0002077!7.18e-07!33 | |ontology_enrichment_celltype=CL:0000066!1.03e-26!254;CL:0002321!8.03e-21!248;CL:0000220!1.53e-20!246;CL:0000076!1.07e-10!62;CL:0002076!3.12e-10!43;CL:0000221!8.07e-08!71;CL:0000223!3.10e-07!59;CL:0002077!7.18e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.49e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.62e-23,253;CL:0002321,6.08e-17,250;CL:0002076,7.71e-10,42;CL:0000076,1.88e-09,63;CL:0000221,6.11e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.21e-17!365;UBERON:0000119!4.31e-14!312;UBERON:0000468!5.18e-14!659;UBERON:0000483!1.09e-13!309;UBERON:0000922!1.13e-12!612;UBERON:0002050!1.03e-11!605;UBERON:0005423!1.03e-11!605;UBERON:0000467!1.41e-11!625;UBERON:0000923!2.50e-11!604;UBERON:0005291!2.50e-11!604;UBERON:0006598!2.50e-11!604;UBERON:0002532!2.50e-11!604;UBERON:0000480!2.55e-11!626;UBERON:0000481!3.00e-10!347;UBERON:0004121!3.36e-10!169;UBERON:0000477!5.86e-10!286;UBERON:0000924!7.34e-10!173;UBERON:0006601!7.34e-10!173;UBERON:0004111!7.86e-10!241;UBERON:0000064!1.55e-09!219;UBERON:0002100!1.94e-08!216;UBERON:0005156!4.62e-08!59;UBERON:0000990!4.62e-08!59;UBERON:0001008!7.17e-08!45;UBERON:0003103!7.48e-08!69;UBERON:0003100!9.51e-08!41;UBERON:0000464!9.88e-08!104;UBERON:0006554!1.52e-07!44;UBERON:0003104!4.21e-07!238;UBERON:0009142!4.21e-07!238;UBERON:0004872!5.83e-07!84;UBERON:0003133!8.24e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;5.70e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001008,1.76e-09,48;UBERON:0006554,4.06e-09,47;UBERON:0000119,1.06e-08,309;UBERON:0000483,1.79e-08,306;UBERON:0000922,1.93e-08,592;UBERON:0003100,7.87e-08,41;UBERON:0003103,1.30e-07,68;UBERON:0004121,2.18e-07,171;UBERON:0000924,2.18e-07,171;UBERON:0006601,2.18e-07,171;UBERON:0005156,3.08e-07,59;UBERON:0000990,3.08e-07,59;UBERON:0005423,3.66e-07,581;UBERON:0004111,4.92e-07,240 | |||
|phase1_expression=3.81524596468169,2.78330681058278,2.96004248601539,0,4.46961094427288,2.61701557230111,2.53299878168311,1.26343974685366,4.44015567939725,2.7030733015166,2.79120467188971,9.17453762946723,6.59417445571134,0.866364470720326,0.994192127183747,2.6893005858071,1.20538905604795,2.92124036154949,0.975865597581014,2.95490539384291,3.26401105990805,2.19418305034661,2.57612388417951,2.18999080116615,2.00868223351684,0.305653622991805,0.164201178899891,0,0,0,0,5.51652734687356,4.819294700452,3.69754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,1.53435074212236,1.80719576192283,3.00802746381534,1.30361867064741,0,0,1.98523116044542,1.55210578223795,1.40535657109002,1.17881167947941,3.27865759463288,7.04490441290416,0,0,0,0,0,0,2.98143611050058,3.4409383804245,4.51282652089873,6.21838736116411,9.64848703282784,3.85165258716094,5.43386912995707,1.29208379584664,0.35576626268671,0.33472061276467,3.22263453687318,0.760272105718513,0.976248230192678,2.20597848207521,12.1521292182264,0.267899184852239,0,0.450445921933289,1.53316637465883,0.949265659568129,1.83201743930407,0,0,4.36094052142534,0.993943903390637,1.77282716330412,0.926864265692532,0.860509862246441,1.06400514659507,2.80338800071154,5.33744978648525,2.4666754841716,1.24484414159907,1.21239604862719,0.980771418680752,1.66493170409425,1.72852777344,1.87457145467037,0.624320153660641,0.570471821544449,0.896692083310806,1.17434498643765,1.13311061057692,0.702254033511242,1.22492502752936,0.61417158655884,1.34323515528495,2.37600571456411,0.494533858557114,0.910161361938026,2.15585442544872,1.0100166837244,1.00094815897571,1.10825646193673,0.877955241761676,0.919463387397059,0.45071417671979,2.1552114800404,0.179389635688862,1.06778694409284,0.847727604638247,0.900273288253207,1.75189299705346,1.03056216018252,1.8611685633159,0.675105328965065,1.75386609290158,0.504867548488229,0.552299391853796,1.93975268182574,2.13005755509969,1.91428986632517,0.67824236924195,7.92369497969517,9.27336810008838,7.7437240755031,1.34171076742555,2.65059536642971,1.62671520017326,1.24393266018445,2.01856680700503,2.18986415445498,3.12899064659632,1.28648187638577,1.38134921352481,1.85747171212792,0.721879481669586,1.41968160047813,2.36018566109342,1.68707720918437,1.65440959098591,1.74303555273925,0.71181185733329,1.48314438976181,1.56977172100277,0.769494313892781,0.738155454624648,1.40241773803446,2.4694440679884,0,0,0,0,0.882926198829301,0.983907508344908,3.77449182656756,6.58501712451753,6.74410519545717,5.32803553781643,6.01824893530442,0.651616610620649,0,0,3.82570336417754,4.46153038096122,0.144366447761074,0,0.380508304469197,0,2.57545848628462,0,0,0,7.49870671894216,7.0552493843521,5.81277898693785,8.50805965677059,7.84711633987697,9.20118429996507,0.492663237895943,0.088048434013226,0,0,0,1.8414389344729,0.763976851116555,1.17217447210047,1.71072446022705,1.54241239054985,0.300343057843917,4.0015700568281,2.01835951821649,6.97536110133248,0.80672114403045,1.42198887333556,0,1.690605505112,6.11657668145202,1.04007436911366,1.02882949704857,0,0.799266537048298,1.00084595560703,1.08524321078289,0.823240336780769,0.977208552881205,0.710783897485092,0.791951872933429,4.22015127883421,2.61460037580088,2.69927076191554,0,0,0,0.718874566474748,1.14861935834114,2.85273810081437,1.01346914667305,0.821905290201534,1.25342674267927,0,0,0,0,1.52456774533478,1.30139853857622,1.54657762555539,0.502548796003046,0,0,0,0,1.59498939234882,1.50051156317903,1.62759014219841,2.07970861530807,1.96271887676878,1.89242898040722,3.5142424497814,0.902838299183157,0,3.10419213877515,0,1.47495334833363,2.69339204851057,0.979005787313703,0.686286847621712,0,0,0,3.33440328590885,9.98612637062982,11.7932214398575,1.73675465473144,0.920771839728375,1.40330047216537,4.35673107469383,0.511707249066704,3.05622450172854,1.48418066444991,0.771048469013278,2.66342587969691,1.47828880824856,1.03850885836724,1.27831416305955,4.95523743325651,10.2258299854675,5.61694032508968,0.34444334449382,0.546273504020151,1.57349297951309,4.51199612907412,3.31165949548983,3.92174884588428,10.2297457257282,3.79985864014353,0,1.19065593693561,0.863663664408557,0,1.89662506280697,2.00675909541941,4.07802036872061,2.49322802678617,2.91037181138832,0,0,2.3080511260475,0.984043937099117,0.650756789328606,1.64865618636356,0.183138929636687,0.495056999523528,7.46545199395024,7.15066270640173,6.42735719376638,2.41676795730305,2.00263202249038,0.921022048356777,0.551346289938122,1.28904293841928,1.16013355131383,1.10794615640931,2.22580089116843,6.44611169907815,7.30322255987403,4.97689578728878,7.99146468758844,2.78907329578371,1.25924938732256,2.7881490806424,2.46426864140871,2.66153015158511,4.34966496037536,1.8532421910392,1.86062352764589,2.60510858551767,0.949138274156178,0.571890581771475,1.02359116524534,1.28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| ||
|short_description=p3@KCTD1 | |short_description=p3@KCTD1 | ||
}} | }} |
Latest revision as of 02:07, 19 September 2015
Short description: | p3@KCTD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCTD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000408011, NM_001136205, uc002kvw.2_5end |
EntrezGene: | KCTD1 |
HGNC: | 18249 |
UniProt: | Q719H9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.62e-23 | 253 |
embryonic cell | 6.08e-17 | 250 |
endo-epithelial cell | 7.71e-10 | 42 |
squamous epithelial cell | 1.88e-09 | 63 |
ectodermal cell | 6.11e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
renal system | 1.76e-09 | 48 |
urinary system structure | 4.06e-09 | 47 |
cell layer | 1.06e-08 | 309 |
epithelium | 1.79e-08 | 306 |
embryo | 1.93e-08 | 592 |
female organism | 7.87e-08 | 41 |
compound organ | 1.30e-07 | 68 |
ectoderm-derived structure | 2.18e-07 | 171 |
ectoderm | 2.18e-07 | 171 |
presumptive ectoderm | 2.18e-07 | 171 |
reproductive structure | 3.08e-07 | 59 |
reproductive system | 3.08e-07 | 59 |
developing anatomical structure | 3.66e-07 | 581 |
anatomical conduit | 4.92e-07 | 240 |