FFCP PHASE1:Hg19::chr18:24129367..24129440,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:24129367..24129440,- to FFCP PHASE1:Hg19::chr18:24129367..24129440,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=284252 | |EntrezGene=284252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18249 | |HGNC=18249 | ||
|TSSclassifier=strong | |||
|UniProt=Q719H9 | |UniProt=Q719H9 | ||
|association_with_transcript=0bp_to_ENST00000408011,NM_001136205,uc002kvw.2_5end | |||
|cluster_id=chr18:24129367..24129440,- | |||
|description=CAGE_peak_3_at_KCTD1_5end | |||
|id=chr18:24129367..24129440,- | |||
|ontology_enrichment_celltype=CL:0000066!1.03e-26!254;CL:0002321!8.03e-21!248;CL:0000220!1.53e-20!246;CL:0000076!1.07e-10!62;CL:0002076!3.12e-10!43;CL:0000221!8.07e-08!71;CL:0000223!3.10e-07!59;CL:0002077!7.18e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.49e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.62e-23,253;CL:0002321,6.08e-17,250;CL:0002076,7.71e-10,42;CL:0000076,1.88e-09,63;CL:0000221,6.11e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.21e-17!365;UBERON:0000119!4.31e-14!312;UBERON:0000468!5.18e-14!659;UBERON:0000483!1.09e-13!309;UBERON:0000922!1.13e-12!612;UBERON:0002050!1.03e-11!605;UBERON:0005423!1.03e-11!605;UBERON:0000467!1.41e-11!625;UBERON:0000923!2.50e-11!604;UBERON:0005291!2.50e-11!604;UBERON:0006598!2.50e-11!604;UBERON:0002532!2.50e-11!604;UBERON:0000480!2.55e-11!626;UBERON:0000481!3.00e-10!347;UBERON:0004121!3.36e-10!169;UBERON:0000477!5.86e-10!286;UBERON:0000924!7.34e-10!173;UBERON:0006601!7.34e-10!173;UBERON:0004111!7.86e-10!241;UBERON:0000064!1.55e-09!219;UBERON:0002100!1.94e-08!216;UBERON:0005156!4.62e-08!59;UBERON:0000990!4.62e-08!59;UBERON:0001008!7.17e-08!45;UBERON:0003103!7.48e-08!69;UBERON:0003100!9.51e-08!41;UBERON:0000464!9.88e-08!104;UBERON:0006554!1.52e-07!44;UBERON:0003104!4.21e-07!238;UBERON:0009142!4.21e-07!238;UBERON:0004872!5.83e-07!84;UBERON:0003133!8.24e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;5.70e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001008,1.76e-09,48;UBERON:0006554,4.06e-09,47;UBERON:0000119,1.06e-08,309;UBERON:0000483,1.79e-08,306;UBERON:0000922,1.93e-08,592;UBERON:0003100,7.87e-08,41;UBERON:0003103,1.30e-07,68;UBERON:0004121,2.18e-07,171;UBERON:0000924,2.18e-07,171;UBERON:0006601,2.18e-07,171;UBERON:0005156,3.08e-07,59;UBERON:0000990,3.08e-07,59;UBERON:0005423,3.66e-07,581;UBERON:0004111,4.92e-07,240 | |||
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| ||
|short_description=p3@KCTD1 | |||
}} | }} |
Latest revision as of 02:07, 19 September 2015
Short description: | p3@KCTD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCTD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000408011, NM_001136205, uc002kvw.2_5end |
EntrezGene: | KCTD1 |
HGNC: | 18249 |
UniProt: | Q719H9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.62e-23 | 253 |
embryonic cell | 6.08e-17 | 250 |
endo-epithelial cell | 7.71e-10 | 42 |
squamous epithelial cell | 1.88e-09 | 63 |
ectodermal cell | 6.11e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
renal system | 1.76e-09 | 48 |
urinary system structure | 4.06e-09 | 47 |
cell layer | 1.06e-08 | 309 |
epithelium | 1.79e-08 | 306 |
embryo | 1.93e-08 | 592 |
female organism | 7.87e-08 | 41 |
compound organ | 1.30e-07 | 68 |
ectoderm-derived structure | 2.18e-07 | 171 |
ectoderm | 2.18e-07 | 171 |
presumptive ectoderm | 2.18e-07 | 171 |
reproductive structure | 3.08e-07 | 59 |
reproductive system | 3.08e-07 | 59 |
developing anatomical structure | 3.66e-07 | 581 |
anatomical conduit | 4.92e-07 | 240 |