FFCP PHASE1:Hg19::chr2:190649082..190649102,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:190649082..190649102,- to FFCP PHASE1:Hg19::chr2:190649082..190649102,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=94101 | |EntrezGene=94101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16036 | |HGNC=16036 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P0S3 | |UniProt=Q9P0S3 | ||
|association_with_transcript=0bp_to_ENST00000392349,ENST00000392350,NM_001128150,NM_016467,uc002urd.3,uc002ure.3,uc002urf.3_5end | |||
|cluster_id=chr2:190649082..190649102,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_ORMDL1_5end | |||
|id=chr2:190649082..190649102,- | |||
|ontology_enrichment_celltype=CL:0000542!5.07e-21!53;CL:0000051!5.07e-21!53;CL:0000838!1.28e-20!52;CL:0000037!2.00e-13!172;CL:0000566!2.00e-13!172;CL:0000988!1.52e-12!182;CL:0000084!1.87e-12!25;CL:0000827!1.87e-12!25;CL:0000791!2.39e-12!18;CL:0000789!2.39e-12!18;CL:0002420!2.39e-12!18;CL:0002419!2.39e-12!18;CL:0000790!2.39e-12!18;CL:0002032!4.07e-11!165;CL:0000837!4.07e-11!165;CL:0000738!2.33e-10!140;CL:0002087!5.47e-10!119;CL:0000219!7.52e-09!390;CL:0002031!1.17e-08!124;CL:0000134!1.39e-08!358;CL:0000625!2.44e-08!11;CL:0000945!5.84e-08!24;CL:0000826!5.84e-08!24;CL:0002320!2.00e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.16e-12;18!CL:0000789;1.16e-12;18!CL:0002419;1.16e-12;18!CL:0000084;1.49e-12;25!CL:0000542;3.66e-12;53!CL:0000625;1.71e-08;11!CL:0000945;8.74e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.05e-21,53;CL:0000051,5.05e-21,53;CL:0000838,1.27e-20,52;CL:0000037,9.15e-15,168;CL:0000988,6.88e-14,177;CL:0000084,1.87e-12,25;CL:0000827,1.87e-12,25;CL:0000791,2.38e-12,18;CL:0000789,2.38e-12,18;CL:0002420,2.38e-12,18;CL:0002419,2.38e-12,18;CL:0000790,2.38e-12,18;CL:0002032,2.48e-12,161;CL:0000837,2.48e-12,161;CL:0000738,1.24e-11,136;CL:0002087,2.40e-11,115;CL:0002031,7.30e-10,120;CL:0000219,1.87e-09,386;CL:0000134,3.46e-09,354;CL:0000625,2.43e-08,11;CL:0002320,5.79e-08,361;CL:0000945,5.83e-08,24;CL:0000826,5.83e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000790;1.16e-12;18!CL:0000051;3.66e-12;53 | |||
|ontology_enrichment_disease=DOID:2531!3.25e-07!51;DOID:0060083!3.25e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.25e-07,51;DOID:0060083,3.25e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002384!4.15e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.24e-07,371 | |||
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| ||
|short_description=p3@ORMDL1 | |||
}} | }} |
Latest revision as of 02:27, 19 September 2015
Short description: | p3@ORMDL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ORMDL1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000392349, ENST00000392350, NM_001128150, NM_016467, uc002urd.3, uc002ure.3, uc002urf.3_5end |
EntrezGene: | ORMDL1 |
HGNC: | 16036 |
UniProt: | Q9P0S3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.05e-21 | 53 |
common lymphoid progenitor | 5.05e-21 | 53 |
lymphoid lineage restricted progenitor cell | 1.27e-20 | 52 |
hematopoietic stem cell | 9.15e-15 | 168 |
hematopoietic cell | 6.88e-14 | 177 |
T cell | 1.87e-12 | 25 |
pro-T cell | 1.87e-12 | 25 |
mature alpha-beta T cell | 2.38e-12 | 18 |
alpha-beta T cell | 2.38e-12 | 18 |
immature T cell | 2.38e-12 | 18 |
mature T cell | 2.38e-12 | 18 |
immature alpha-beta T cell | 2.38e-12 | 18 |
hematopoietic oligopotent progenitor cell | 2.48e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.48e-12 | 161 |
leukocyte | 1.24e-11 | 136 |
nongranular leukocyte | 2.40e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 7.30e-10 | 120 |
motile cell | 1.87e-09 | 386 |
mesenchymal cell | 3.46e-09 | 354 |
CD8-positive, alpha-beta T cell | 2.43e-08 | 11 |
connective tissue cell | 5.79e-08 | 361 |
lymphocyte of B lineage | 5.83e-08 | 24 |
pro-B cell | 5.83e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.24e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.25e-07 | 51 |
immune system cancer | 3.25e-07 | 51 |