FFCP PHASE1:Hg19::chr5:87437100..87437115,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=100289347 | |EntrezGene=100289347 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | ||
|HGNC= | |HGNC= | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_AK094268_5end | |association_with_transcript=23bp_to_AK094268_5end | ||
|cluster_id=chr5:87437100..87437115,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_LOC100289347_5end | |description=CAGE_peak_1_at_LOC100289347_5end | ||
Latest revision as of 02:35, 19 September 2015
| Short description: | p1@LOC100289347 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_LOC100289347_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | 23bp_to_AK094268_5end |
| EntrezGene: | LOC100289347 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@LOC100289347 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| oligodendrocyte | 2.58e-12 | 7 |
| macroglial cell | 2.58e-12 | 7 |
| astrocyte | 2.58e-12 | 7 |
| oligodendrocyte precursor cell | 2.58e-12 | 7 |
| astrocyte of the cerebral cortex | 2.09e-11 | 3 |
| neural cell | 6.12e-09 | 25 |
| neuronal stem cell | 2.95e-07 | 8 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 3.19e-132 | 56 |
| neural rod | 3.19e-132 | 56 |
| future spinal cord | 3.19e-132 | 56 |
| neural keel | 3.19e-132 | 56 |
| regional part of nervous system | 7.68e-128 | 53 |
| regional part of brain | 7.68e-128 | 53 |
| central nervous system | 9.72e-114 | 81 |
| brain | 4.66e-106 | 68 |
| future brain | 4.66e-106 | 68 |
| nervous system | 1.44e-101 | 89 |
Showing 1 to 10 of 92 entries
