FFCP PHASE1:Hg19::chr1:6884943..6884957,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23261 | |EntrezGene=23261 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18806 | |HGNC=18806 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-212bp_to_ENST00000482934_5end | |association_with_transcript=-212bp_to_ENST00000482934_5end | ||
|cluster_id=chr1:6884943..6884957,+ | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_7_at_CAMTA1_5end | |description=CAGE_peak_7_at_CAMTA1_5end | ||
|id=chr1:6884943..6884957,+ | |id=chr1:6884943..6884957,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.24e-23;24!CL:0002593;2.59e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.16e-23,24;CL:0000826,3.16e-23,24;CL:0002593,2.32e-12,2;CL:0000838,7.57e-11,52;CL:0000542,1.20e-10,53;CL:0000051,1.20e-10,53 | |||
|ontology_enrichment_development_v019=UBERON:0010115;3.28e-23;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2355;5.73e-23;1!DOID:74;3.43e-12;2!DOID:0060058;1.03e-09;10!DOID:1287;9.90e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,5.13e-23,1;DOID:74,3.24e-12,2;DOID:0060058,1.01e-09,10;DOID:1287,9.63e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.86e-18!115;UBERON:0002240!4.94e-10!3;UBERON:0001049!6.48e-10!57;UBERON:0005068!6.48e-10!57;UBERON:0006241!6.48e-10!57;UBERON:0007135!6.48e-10!57;UBERON:0005743!5.94e-09!86;UBERON:0002346!1.55e-08!90;UBERON:0001017!1.60e-08!82;UBERON:0003075!3.78e-08!86;UBERON:0007284!3.78e-08!86;UBERON:0000073!1.13e-07!94;UBERON:0001016!1.13e-07!94;UBERON:0002360!1.87e-07!2;UBERON:0000094!1.87e-07!2;UBERON:0007645!1.87e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;3.28e-23;1!UBERON:0002360;2.59e-12;2!UBERON:0000094;2.59e-12;2!UBERON:0002456;2.59e-12;2!UBERON:0010743;2.59e-12;2!UBERON:0002106;1.21e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,4.10e-23,1;UBERON:0007645,4.10e-23,1;UBERON:0007647,4.10e-23,1;UBERON:0010115,4.10e-23,1;UBERON:0002456,2.32e-12,2;UBERON:0002360,2.90e-12,2;UBERON:0000094,2.90e-12,2;UBERON:0010743,2.90e-12,2;UBERON:0002106,1.21e-08,3;UBERON:0004854,1.21e-08,3;UBERON:0009034,1.21e-08,3;UBERON:0002095,1.21e-08,3;UBERON:0004782,1.21e-08,3;UBERON:0003281,1.21e-08,3;UBERON:0009664,1.21e-08,3;UBERON:0002296,1.21e-08,3;UBERON:0005602,1.21e-08,3;UBERON:0001179,1.21e-08,3;UBERON:0006293,1.21e-08,3 | |||
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| ||
|short_description=p7@CAMTA1 | |short_description=p7@CAMTA1 | ||
}} | }} |
Latest revision as of 03:04, 19 September 2015
Short description: | p7@CAMTA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CAMTA1_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -212bp_to_ENST00000482934_5end |
EntrezGene: | CAMTA1 |
HGNC: | 18806 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.16e-23 | 24 |
pro-B cell | 3.16e-23 | 24 |
smooth muscle cell of the internal thoracic artery | 2.32e-12 | 2 |
lymphoid lineage restricted progenitor cell | 7.57e-11 | 52 |
lymphocyte | 1.20e-10 | 53 |
common lymphoid progenitor | 1.20e-10 | 53 |
Ontology term | p-value | n |
---|---|---|
dura mater | 4.10e-23 | 1 |
future meninx | 4.10e-23 | 1 |
ectomeninx | 4.10e-23 | 1 |
future dura mater | 4.10e-23 | 1 |
internal thoracic artery | 2.32e-12 | 2 |
meninx | 2.90e-12 | 2 |
membrane organ | 2.90e-12 | 2 |
meningeal cluster | 2.90e-12 | 2 |
spleen | 1.21e-08 | 3 |
gastrointestinal system mesentery | 1.21e-08 | 3 |
stomach region | 1.21e-08 | 3 |
mesentery | 1.21e-08 | 3 |
gastrointestinal system serosa | 1.21e-08 | 3 |
mesentery of stomach | 1.21e-08 | 3 |
gut mesentery | 1.21e-08 | 3 |
dorsal mesentery | 1.21e-08 | 3 |
dorsal mesogastrium | 1.21e-08 | 3 |
peritoneal cavity | 1.21e-08 | 3 |
spleen primordium | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 5.13e-23 | 1 |
hematopoietic system disease | 3.24e-12 | 2 |
lymphoma | 1.01e-09 | 10 |
cardiovascular system disease | 9.63e-07 | 4 |