FFCP PHASE1:Hg19::chr1:183441471..183441498,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9887 | |EntrezGene=9887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16792 | |HGNC=16792 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCE5,B4DRB2,E9PCI0,Q92540,Q6TV06,E9PEH2 | |UniProt=E9PCE5,B4DRB2,E9PCI0,Q92540,Q6TV06,E9PEH2 | ||
|association_with_transcript=-7bp_to_ENST00000456731,NM_001174061,NM_173156,NM_201568,NM_201569_5end | |association_with_transcript=-7bp_to_ENST00000456731,NM_001174061,NM_173156,NM_201568,NM_201569_5end | ||
|cluster_id=chr1:183441471..183441498,+ | |||
|description=CAGE_peak_3_at_SMG7_5end | |description=CAGE_peak_3_at_SMG7_5end | ||
|id=chr1:183441471..183441498,+ | |id=chr1:183441471..183441498,+ | ||
|ontology_enrichment_celltype=CL:0000738!9.08e-08!140;CL:0000037!3.14e-07!172;CL:0000566!3.14e-07!172;CL:0002087!8.23e-07!119 | |ontology_enrichment_celltype=CL:0000738!9.08e-08!140;CL:0000037!3.14e-07!172;CL:0000566!3.14e-07!172;CL:0002087!8.23e-07!119 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.39e-11!115;UBERON:0000073!8.49e-08!94;UBERON:0001016!8.49e-08!94;UBERON:0001869!1.89e-07!32;UBERON:0002619!4.11e-07!22;UBERON:0001893!6.97e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!1.39e-11!115;UBERON:0000073!8.49e-08!94;UBERON:0001016!8.49e-08!94;UBERON:0001869!1.89e-07!32;UBERON:0002619!4.11e-07!22;UBERON:0001893!6.97e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.29e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002619;1.29e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.69e-12,114;UBERON:0002619,5.43e-08,22;UBERON:0001869,6.69e-07,32;UBERON:0001950,9.32e-07,20 | |||
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| ||
|short_description=p3@SMG7 | |short_description=p3@SMG7 | ||
}} | }} |
Latest revision as of 03:16, 19 September 2015
Short description: | p3@SMG7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SMG7_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000456731, NM_001174061, NM_173156, NM_201568, NM_201569_5end |
EntrezGene: | SMG7 |
HGNC: | 16792 |
UniProt: | E9PCE5B4DRB2E9PCI0Q92540Q6TV06E9PEH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.69e-12 | 114 |
regional part of cerebral cortex | 5.43e-08 | 22 |
cerebral hemisphere | 6.69e-07 | 32 |
neocortex | 9.32e-07 | 20 |