FFCP PHASE1:Hg19::chr22:19707027..19707059,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5413 | |EntrezGene=5413 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9164 | |HGNC=9164 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000477238_5end | |association_with_transcript=0bp_to_ENST00000477238_5end | ||
|cluster_id=chr22:19707027..19707059,+ | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_20_at_SEPT5_5end | |description=CAGE_peak_20_at_SEPT5_5end | ||
|id=chr22:19707027..19707059,+ | |id=chr22:19707027..19707059,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.16e-26;1!UBERON:0005062;1.62e-25;4!UBERON:0007284;1.62e-25;4!UBERON:0003104;1.11e-07;31 | |||
|ontology_enrichment_disease=DOID:114!1.10e-14!2;DOID:178!4.07e-08!1;DOID:326!4.07e-08!1;DOID:3978!4.07e-08!1;DOID:3394!4.07e-08!1;DOID:5844!4.07e-08!1;DOID:1287!9.11e-08!4 | |ontology_enrichment_disease=DOID:114!1.10e-14!2;DOID:178!4.07e-08!1;DOID:326!4.07e-08!1;DOID:3978!4.07e-08!1;DOID:3394!4.07e-08!1;DOID:5844!4.07e-08!1;DOID:1287!9.11e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:114;3.53e-50;2!DOID:178;7.62e-26;1!DOID:326;7.62e-26;1!DOID:3978;7.62e-26;1!DOID:3394;7.62e-26;1!DOID:5844;7.62e-26;1!DOID:1287;1.05e-25;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.00e-50,2;DOID:178,9.79e-26,1;DOID:326,9.79e-26,1;DOID:3978,9.79e-26,1;DOID:3394,9.79e-26,1;DOID:5844,9.79e-26,1;DOID:1287,1.11e-25,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007100;1.13e-35;25!UBERON:0003978;1.27e-33;3!UBERON:0000946;1.27e-33;3!UBERON:0002135;7.62e-26;1!UBERON:0002146;7.62e-26;1!UBERON:0005623;7.62e-26;1!UBERON:0002133;1.21e-13;2!UBERON:0000948;7.66e-11;22!UBERON:0010313;7.67e-11;10!UBERON:0003103;7.28e-09;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,7.70e-34,3;UBERON:0009751,7.70e-34,3;UBERON:0000946,7.70e-34,3;UBERON:0002523,7.70e-34,3;UBERON:0005983,7.70e-34,3;UBERON:0002165,7.70e-34,3;UBERON:0002062,7.70e-34,3;UBERON:0007280,7.70e-34,3;UBERON:0007100,4.19e-33,27;UBERON:0002135,4.61e-26,1;UBERON:0002146,5.93e-26,1;UBERON:0005623,5.93e-26,1;UBERON:0004797,3.79e-15,7;UBERON:0002133,9.40e-14,2;UBERON:0003103,2.81e-13,68;UBERON:0010313,6.61e-11,10;UBERON:0002342,6.61e-11,10;UBERON:0005062,6.61e-11,10;UBERON:0000948,4.92e-10,24;UBERON:0005498,4.92e-10,24;UBERON:0004140,4.92e-10,24;UBERON:0009881,4.92e-10,24;UBERON:0004141,4.92e-10,24;UBERON:0003084,4.92e-10,24;UBERON:0007005,4.92e-10,24;UBERON:0004139,4.92e-10,24;UBERON:0004291,4.92e-10,24;UBERON:0001009,4.38e-08,112 | |||
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|short_description=p20@SEPT5 | |short_description=p20@SEPT5 | ||
}} | }} |
Latest revision as of 03:29, 19 September 2015
Short description: | p20@SEPT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_SEPT5_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 0bp_to_ENST00000477238_5end |
EntrezGene: | SEPT5 |
HGNC: | 9164 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 7.70e-34 | 3 |
cardiac mesenchyme | 7.70e-34 | 3 |
cardial valve | 7.70e-34 | 3 |
tunica intima | 7.70e-34 | 3 |
heart layer | 7.70e-34 | 3 |
endocardium | 7.70e-34 | 3 |
endocardial cushion | 7.70e-34 | 3 |
presumptive endocardium | 7.70e-34 | 3 |
primary circulatory organ | 4.19e-33 | 27 |
mitral valve | 4.61e-26 | 1 |
pulmonary valve | 5.93e-26 | 1 |
semi-lunar valve | 5.93e-26 | 1 |
blood vessel layer | 3.79e-15 | 7 |
atrioventricular valve | 9.40e-14 | 2 |
compound organ | 2.81e-13 | 68 |
neural crest-derived structure | 6.61e-11 | 10 |
neural crest | 6.61e-11 | 10 |
neural fold | 6.61e-11 | 10 |
heart | 4.92e-10 | 24 |
primitive heart tube | 4.92e-10 | 24 |
primary heart field | 4.92e-10 | 24 |
anterior lateral plate mesoderm | 4.92e-10 | 24 |
heart tube | 4.92e-10 | 24 |
heart primordium | 4.92e-10 | 24 |
cardiac mesoderm | 4.92e-10 | 24 |
cardiogenic plate | 4.92e-10 | 24 |
heart rudiment | 4.92e-10 | 24 |
circulatory system | 4.38e-08 | 112 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.00e-50 | 2 |
vascular disease | 9.79e-26 | 1 |
ischemia | 9.79e-26 | 1 |
extrinsic cardiomyopathy | 9.79e-26 | 1 |
myocardial ischemia | 9.79e-26 | 1 |
myocardial infarction | 9.79e-26 | 1 |
cardiovascular system disease | 1.11e-25 | 4 |