FFCP PHASE1:Hg19::chr15:75743915..75743933,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:75743915..75743933,- to FFCP PHASE1:Hg19::chr15:75743915..75743933,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25942 | |EntrezGene=25942 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19353 | |HGNC=19353 | ||
|TSSclassifier=strong | |||
|UniProt=Q96ST3 | |UniProt=Q96ST3 | ||
|association_with_transcript=0bp_to_ENST00000394949,NM_015477,uc002bai.2_5end | |||
|cluster_id=chr15:75743915..75743933,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_SIN3A_5end | |||
|id=chr15:75743915..75743933,- | |||
|ontology_enrichment_celltype=CL:0000037!2.47e-31!172;CL:0000566!2.47e-31!172;CL:0000763!1.15e-30!112;CL:0000049!1.15e-30!112;CL:0000988!2.35e-29!182;CL:0002032!1.55e-28!165;CL:0000837!1.55e-28!165;CL:0000738!4.24e-27!140;CL:0000766!4.73e-26!76;CL:0000557!5.61e-23!71;CL:0000860!3.24e-21!45;CL:0000839!4.81e-20!70;CL:0002009!5.26e-20!65;CL:0002057!5.79e-20!42;CL:0002194!8.29e-19!63;CL:0000576!8.29e-19!63;CL:0000040!8.29e-19!63;CL:0000559!8.29e-19!63;CL:0002031!1.53e-18!124;CL:0002087!1.23e-17!119;CL:0002320!7.72e-08!365;CL:0000134!1.01e-07!358;CL:0000219!1.42e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.85e-19;33!CL:0002057;7.85e-19;33!CL:0000576;2.10e-15;48!CL:0000473;6.25e-15;39!CL:0000234;6.25e-15;39!CL:0000766;3.53e-14;69!CL:0000763;8.78e-12;100!CL:0000094;3.70e-08;8!CL:0000988;8.62e-08;177!CL:0000738;1.73e-07;136!CL:0002087;2.51e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.36e-35,168;CL:0000763,8.44e-35,108;CL:0000049,8.44e-35,108;CL:0000988,1.59e-34,177;CL:0002032,6.42e-32,161;CL:0000837,6.42e-32,161;CL:0000738,1.25e-29,136;CL:0000766,2.54e-28,72;CL:0000557,1.55e-24,67;CL:0000860,2.55e-24,42;CL:0002057,2.55e-24,42;CL:0000473,9.10e-23,48;CL:0000234,9.10e-23,48;CL:0000839,6.42e-21,66;CL:0002009,7.01e-21,61;CL:0002194,2.02e-19,59;CL:0000576,2.02e-19,59;CL:0000040,2.02e-19,59;CL:0000559,2.02e-19,59;CL:0002031,2.92e-19,120;CL:0002087,3.19e-18,115;CL:0000134,6.72e-09,354;CL:0002320,7.83e-09,361;CL:0000094,4.92e-08,8;CL:0000219,3.79e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;7.48e-18;42!CL:0000049;2.56e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;7.65e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,8.29e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.18e-25!102;UBERON:0003061!1.18e-25!102;UBERON:0002193!6.25e-23!112;UBERON:0002371!1.39e-19!80;UBERON:0001474!4.28e-17!86;UBERON:0002405!1.58e-15!115;UBERON:0004765!1.62e-13!101;UBERON:0001434!1.62e-13!101;UBERON:0002384!1.76e-08!375;UBERON:0000178!9.29e-07!15;UBERON:0000179!9.29e-07!15;UBERON:0000463!9.29e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.66e-08;15!UBERON:0000179;1.66e-08;15!UBERON:0000463;1.66e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.88e-29,98;UBERON:0003061,5.88e-29,98;UBERON:0002193,4.68e-26,108;UBERON:0002371,2.66e-21,76;UBERON:0002405,4.77e-19,93;UBERON:0001474,7.75e-19,82;UBERON:0004765,1.80e-16,90;UBERON:0001434,1.26e-14,100;UBERON:0002384,5.22e-10,371;UBERON:0000178,9.95e-09,15;UBERON:0000179,9.95e-09,15;UBERON:0000463,9.95e-09,15 | |||
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| ||
|short_description=p3@SIN3A | |||
}} | }} |
Latest revision as of 03:49, 19 September 2015
Short description: | p3@SIN3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SIN3A_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000394949, NM_015477, uc002bai.2_5end |
EntrezGene: | SIN3A |
HGNC: | 19353 |
UniProt: | Q96ST3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.36e-35 | 168 |
myeloid cell | 8.44e-35 | 108 |
common myeloid progenitor | 8.44e-35 | 108 |
hematopoietic cell | 1.59e-34 | 177 |
hematopoietic oligopotent progenitor cell | 6.42e-32 | 161 |
hematopoietic multipotent progenitor cell | 6.42e-32 | 161 |
leukocyte | 1.25e-29 | 136 |
myeloid leukocyte | 2.54e-28 | 72 |
granulocyte monocyte progenitor cell | 1.55e-24 | 67 |
classical monocyte | 2.55e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.55e-24 | 42 |
defensive cell | 9.10e-23 | 48 |
phagocyte | 9.10e-23 | 48 |
myeloid lineage restricted progenitor cell | 6.42e-21 | 66 |
macrophage dendritic cell progenitor | 7.01e-21 | 61 |
monopoietic cell | 2.02e-19 | 59 |
monocyte | 2.02e-19 | 59 |
monoblast | 2.02e-19 | 59 |
promonocyte | 2.02e-19 | 59 |
hematopoietic lineage restricted progenitor cell | 2.92e-19 | 120 |
nongranular leukocyte | 3.19e-18 | 115 |
mesenchymal cell | 6.72e-09 | 354 |
connective tissue cell | 7.83e-09 | 361 |
granulocyte | 4.92e-08 | 8 |
motile cell | 3.79e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.88e-29 | 98 |
blood island | 5.88e-29 | 98 |
hemolymphoid system | 4.68e-26 | 108 |
bone marrow | 2.66e-21 | 76 |
immune system | 4.77e-19 | 93 |
bone element | 7.75e-19 | 82 |
skeletal element | 1.80e-16 | 90 |
skeletal system | 1.26e-14 | 100 |
connective tissue | 5.22e-10 | 371 |
blood | 9.95e-09 | 15 |
haemolymphatic fluid | 9.95e-09 | 15 |
organism substance | 9.95e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 8.29e-07 | 31 |