FFCP PHASE1:Hg19::chr11:64428818..64428829,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9379 | |EntrezGene=9379 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8009 | |HGNC=8009 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000496291_5end | |association_with_transcript=20bp_to_ENST00000496291_5end | ||
|cluster_id=chr11:64428818..64428829,- | |||
|description=CAGE_peak_12_at_NRXN2_5end | |description=CAGE_peak_12_at_NRXN2_5end | ||
|id=chr11:64428818..64428829,- | |id=chr11:64428818..64428829,- | ||
|ontology_enrichment_celltype=CL:0000057!5.49e-21!75;CL:0000055!1.54e-19!180;CL:0002620!3.18e-17!23;CL:0000188!1.19e-10!9;CL:0002551!1.57e-08!6;CL:0002556!5.38e-08!6;CL:0000680!2.69e-07!57;CL:0000056!2.69e-07!57;CL:0000355!2.69e-07!57;CL:0000515!7.43e-07!4 | |ontology_enrichment_celltype=CL:0000057!5.49e-21!75;CL:0000055!1.54e-19!180;CL:0002620!3.18e-17!23;CL:0000188!1.19e-10!9;CL:0002551!1.57e-08!6;CL:0002556!5.38e-08!6;CL:0000680!2.69e-07!57;CL:0000056!2.69e-07!57;CL:0000355!2.69e-07!57;CL:0000515!7.43e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.69e-16;23!CL:0000056;4.69e-12;4!CL:0000680;1.09e-11;7!CL:0000569;1.77e-11;4!CL:0000515;6.65e-08;3!CL:0000134;7.81e-08;55!CL:0002551;8.33e-08;6!CL:0000346;1.14e-07;3!CL:1000428;1.14e-07;3!CL:0000723;2.11e-07;61!CL:0000048;4.66e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,8.84e-16,23;CL:0000515,4.72e-12,4;CL:0000569,3.17e-11,4;CL:0000011,3.17e-11,4;CL:0000057,1.34e-09,76;CL:0000346,7.90e-08,3;CL:1000428,7.90e-08,3;CL:0002551,1.03e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000515;4.69e-12;4!CL:0000011;1.77e-11;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.43e-16!83;UBERON:0002329!5.43e-16!83;UBERON:0003077!5.43e-16!83;UBERON:0003059!5.43e-16!83;UBERON:0007282!5.43e-16!83;UBERON:0009618!5.43e-16!83;UBERON:0007285!5.43e-16!83;UBERON:0002199!1.69e-15!45;UBERON:0002416!1.69e-15!45;UBERON:0002097!7.20e-14!40;UBERON:0004290!3.42e-13!70;UBERON:0003102!8.46e-12!95;UBERON:0000486!1.25e-10!82;UBERON:0002067!8.41e-10!9;UBERON:0004016!8.41e-10!9;UBERON:0010083!8.41e-10!9;UBERON:0005256!1.84e-08!143;UBERON:0001758!5.38e-08!6;UBERON:0003672!5.38e-08!6;UBERON:0001134!6.99e-08!61;UBERON:0002036!6.99e-08!61;UBERON:0003082!6.99e-08!61;UBERON:0002385!2.06e-07!63;UBERON:0001015!2.06e-07!63;UBERON:0000383!2.06e-07!63;UBERON:0000475!6.12e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.67e-13;9!UBERON:0002199;1.32e-11;46!UBERON:0002416;1.32e-11;46!UBERON:0002097;1.56e-11;41!UBERON:0003102;3.51e-09;50!UBERON:0000412;1.14e-07;3!UBERON:0001992;1.14e-07;3!UBERON:0001134;1.39e-07;16!UBERON:0002036;1.39e-07;16!UBERON:0002371;4.87e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.17e-15,46;UBERON:0002416,2.17e-15,46;UBERON:0002097,5.84e-15,41;UBERON:0002067,1.59e-13,9;UBERON:0004016,1.59e-13,9;UBERON:0010083,1.59e-13,9;UBERON:0000412,7.90e-08,3;UBERON:0001992,7.90e-08,3;UBERON:0002384,1.38e-07,371;UBERON:0003102,8.76e-07,99 | |||
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| ||
|short_description=p12@NRXN2 | |short_description=p12@NRXN2 | ||
}} | }} |
Latest revision as of 03:58, 19 September 2015
Short description: | p12@NRXN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_NRXN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000496291_5end |
EntrezGene: | NRXN2 |
HGNC: | 8009 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 8.84e-16 | 23 |
skeletal muscle myoblast | 4.72e-12 | 4 |
cardiac mesenchymal cell | 3.17e-11 | 4 |
migratory trunk neural crest cell | 3.17e-11 | 4 |
fibroblast | 1.34e-09 | 76 |
hair follicle dermal papilla cell | 7.90e-08 | 3 |
stem cell of epidermis | 7.90e-08 | 3 |
fibroblast of dermis | 1.03e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
integument | 2.17e-15 | 46 |
integumental system | 2.17e-15 | 46 |
skin of body | 5.84e-15 | 41 |
dermis | 1.59e-13 | 9 |
dermatome | 1.59e-13 | 9 |
future dermis | 1.59e-13 | 9 |
dermal papilla | 7.90e-08 | 3 |
papillary layer of dermis | 7.90e-08 | 3 |
connective tissue | 1.38e-07 | 371 |
surface structure | 8.76e-07 | 99 |