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FFCP PHASE1:Hg19::chr12:54402790..54402805,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=3224
|EntrezGene=3224
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=5129
|HGNC=5129
|TSSclassifier=strong
|UniProt=P31273
|UniProt=P31273
|association_with_transcript=-26bp_to_ENST00000040584_5end
|association_with_transcript=-26bp_to_ENST00000040584_5end
|cluster_id=chr12:54402790..54402805,+
|coexpression_cluster_id=C1362
|description=CAGE_peak_2_at_HOXC8_5end
|description=CAGE_peak_2_at_HOXC8_5end
|id=chr12:54402790..54402805,+
|id=chr12:54402790..54402805,+
|ontology_enrichment_celltype=CL:0000055!8.32e-16!180;CL:0002334!6.67e-12!12;CL:0000136!1.02e-10!15;CL:0002620!2.18e-10!23;CL:0000057!6.45e-10!75;CL:0002570!3.48e-07!8;CL:0000325!8.63e-07!39
|ontology_enrichment_celltype=CL:0000055!8.32e-16!180;CL:0002334!6.67e-12!12;CL:0000136!1.02e-10!15;CL:0002620!2.18e-10!23;CL:0000057!6.45e-10!75;CL:0002570!3.48e-07!8;CL:0000325!8.63e-07!39
|ontology_enrichment_celltype_v019=CL:0002334;3.79e-18;12!CL:0002620;2.03e-11;23!CL:0000136;2.99e-10;13!CL:0002570;1.06e-08;8!CL:0000680;1.11e-08;7
|ontology_enrichment_celltype_v019_2=CL:0002334,3.46e-18,12;CL:0000136,3.66e-13,15;CL:0000057,6.32e-13,76;CL:0002620,2.09e-11,23;CL:0002570,7.79e-09,8
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002199!4.99e-11!45;UBERON:0002416!4.99e-11!45;UBERON:0002097!2.85e-09!40;UBERON:0001013!3.19e-09!14;UBERON:0002100!6.22e-09!216;UBERON:0003886!1.08e-07!63
|ontology_enrichment_uberon_v019=UBERON:0003688;1.35e-09;6!UBERON:0002358;1.35e-09;6!UBERON:0003684;1.35e-09;6!UBERON:0001178;1.35e-09;6!UBERON:0001134;1.57e-09;16!UBERON:0002036;1.57e-09;16!UBERON:0001013;1.90e-09;14!UBERON:0011135;3.32e-08;5!UBERON:0002216;3.32e-08;5!UBERON:0011134;3.32e-08;5!UBERON:0002209;3.32e-08;5!UBERON:0002213;3.32e-08;5!UBERON:0007844;3.32e-08;5!UBERON:0011138;3.32e-08;5!UBERON:0001130;3.32e-08;5!UBERON:0001066;3.32e-08;5!UBERON:0001468;3.32e-08;5!UBERON:0004457;1.02e-07;9!UBERON:0000042;1.02e-07;9!UBERON:0002097;3.20e-07;41!UBERON:0002199;6.40e-07;46!UBERON:0002416;6.40e-07;46
|ontology_enrichment_uberon_v019_2=UBERON:0002199,6.86e-11,46;UBERON:0002416,6.86e-11,46;UBERON:0003688,1.08e-09,6;UBERON:0002358,1.08e-09,6;UBERON:0003684,1.08e-09,6;UBERON:0001178,1.08e-09,6;UBERON:0001013,1.47e-09,14;UBERON:0002097,4.62e-09,41;UBERON:0011135,2.66e-08,5;UBERON:0002216,2.66e-08,5;UBERON:0011134,2.66e-08,5;UBERON:0002209,2.66e-08,5;UBERON:0002213,2.66e-08,5;UBERON:0005856,2.66e-08,5;UBERON:0005866,2.66e-08,5;UBERON:0005863,2.66e-08,5;UBERON:0007844,2.66e-08,5;UBERON:0011138,2.66e-08,5;UBERON:0001130,2.66e-08,5;UBERON:0001066,2.66e-08,5;UBERON:0001468,2.66e-08,5;UBERON:0003104,4.11e-08,160;UBERON:0009142,4.11e-08,160
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|short_description=p2@HOXC8
|short_description=p2@HOXC8
}}
}}

Latest revision as of 04:52, 19 September 2015

Short description:p2@HOXC8
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_2_at_HOXC8_5end
Coexpression cluster:C1362_Preadipocyte_Adipocyte_Fibroblast_Mesenchymal_mesenchymal_Myoblast_Smooth
Association with transcript: -26bp_to_ENST00000040584_5end
EntrezGene:HOXC8
HGNC: 5129
UniProt: P31273
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data