FFCP PHASE1:Hg19::chr12:54447599..54447630,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:54447599..54447630,+
|short_description=p3@HOXC4
|description=CAGE_peak_3_at_HOXC4_5end
|association_with_transcript=-30bp_to_ENST00000430889,NM_153633,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3221 | |EntrezGene=3221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5126 | |HGNC=5126 | ||
|TSSclassifier=strong | |||
|UniProt=P09017,Q86TF7 | |UniProt=P09017,Q86TF7 | ||
|association_with_transcript=-30bp_to_ENST00000430889,NM_153633,uc001sex.2_5end | |||
|cluster_id=chr12:54447599..54447630,+ | |||
|description=CAGE_peak_3_at_HOXC4_5end | |||
|id=chr12:54447599..54447630,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.65e-08!24;CL:0000826!1.65e-08!24;CL:0000055!9.70e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.93e-10;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.44e-10,24;CL:0000826,3.44e-10,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.95e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.63e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003886!7.93e-07!63 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=2.72517568905835,1.92690471501885,3.10099689011137,0,1.78784437770915,2.61701557230111,0,0,0,5.40614660303319,0.697801167972428,3.05817920982241,4.22027165165526,0.495065411840187,1.32558950291166,2.01697543935533,0,1.46062018077475,1.95173119516203,1.23121058076788,1.42800483870977,3.13454721478088,0,0,0,15.9704018013218,13.3823960803412,13.3808328233255,0,0.767658796194425,0.309632246632152,0,0,0,13.2468912992316,3.55423081218554,0,0,0.200544447470142,0.217010870715852,0,0.647787332037959,0.257575567634187,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,5.27988733383968,4.91524750135918,5.33705552318133,1.70692089026603,2.00197993518006,4.02326707968138,1.32208974556972,3.81621501814146,1.70763890732835,1.76171156811282,0.764546456250458,1.32171328579026,0.560508562981536,0,0,0,0,0.167186495390678,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0.226618685395132,0,0,0,2.54852331459277,1.30216690771284,0.950452044448374,1.50575119077773,0.895906278080929,0,1.4206635122641,0.821127996921047,0.80642697289893,0.534880391567015,0.434473211648397,0,1.34140171940727,1.40648818027883,0.361439152384566,0,0.144846518960824,3.1811437882044,1.45990461090791,0,0,0,0.589405839739707,0,0,0,0,0.132957960518865,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0.549605231791222,0,0,2.61656431285521,0,0.886413581652058,2.91300197789081,3.15520282823695,2.12801029319014,0,0,0,0.311211035399766,0,0.653847612453835,0,0,0.468642863667593,0,0.570471821544449,0,3.17073146338165,3.72307772046703,4.9157782345787,0,0,0,0,0,6.37112953356618,4.31170885089743,0,0,0,0,0,0,0.453728732640084,1.61450672119976,0.640672166455702,2.33125091275518,2.70081986475962,2.98852334791473,1.03056216018252,0,0,0.0974370051611986,3.02920529092937,1.65689817556139,0,1.77504796258307,3.32481924151213,1.18692414617341,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,4.17931135228781,4.33127689001751,0,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,9.81692416624121,4.9388881359768,11.7606969108434,0,0,0,0,0.737930631258681,0,4.93876284338815,0,0,0.185176890317059,0.325808305310325,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0,3.13454829459969,4.65014301622339,2.30029607499127,0,0.352193736052904,0.207328115540772,0,0,9.33419046094885,17.1894791501225,11.7217447210047,3.4214489204541,5.86116708408944,8.10926256178577,6.00235508524214,0,0,0,3.10252117818667,0,0,0,0,4.8869401109807,8.5109479213967,2.39779961114489,1.71573592389777,0,4.11620168390384,0,1.06617584622764,0,5.42590878707255,5.22920075160176,4.09889263846434,0,0,0,0,0,1.42636905040718,0.579125226670317,0.821905290201534,0.895304816199478,3.47463946379935,0.394061520403854,1.94064817373566,0.641715181398742,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,2.00068208423871,1.89885516589815,0,0,0,0,1.20378439891088,0,0,1.99267679560631,1.65932251687533,0.521301686808497,0.391602314925481,0.343143423810856,0.413536052245775,0.431428401637234,0.640365346820666,1.81876542867756,6.65741758041988,4.23346410661552,1.98486246255021,3.52962538562544,2.24528075546459,3.97231362692673,1.02341449813341,3.21707842287215,1.48418066444991,0,0.355123450626254,4.02423064467665,10.904343012856,0.116210378459959,0.241718899183244,0.40101294060657,0.184161977871793,0,0,0.131124414959424,6.76799419361118,6.62331899097967,9.41219723012226,8.76835347919564,7.07195913582267,0,1.02056223165909,1.94324324491925,1.54227252690289,0.270946437543853,5.01689773854853,3.3133915495855,1.66215201785745,3.35812132083267,0,0,0.256450125116389,0,0,1.23649213977267,2.1060976908219,3.21787049690293,16.653700601889,6.50060246036521,0,2.80345083047154,4.31336127921004,2.76306614507033,2.89456802217514,0.644521469209642,1.88521702088497,2.38634556765083,4.18450567539666,0.330569830721956,0.192190067365106,0,0,5.11330104227014,1.5740617341532,2.7881490806424,4.62050370264133,1.06461206063404,3.47973196830029,0.9266210955196,0,0,0,0.190630193923825,5.62975140884935,1.28381696410176,0.95460974377781,1.56989728039846,0.719489830333259,0.54907405947211,1.53156123049392,2.22400729730648,0,0.842516912477962,3.41343617362713,9.99225307488266,6.33900880540533,0,0,1.13008116620243,6.61638412255349,0.66343897524122,0,4.05142873986681,1.9676842561399,0,0.30982349809975,0,1.29070216983646,0.88424136911809,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0.847294206991012,0.86101074534246,1.68471475667626,0,0.459446800413919,1.01489521846434,0,2.84823593587081,0.238231775457789,1.23408681925858,1.29694662238543,0.540031437238115,0,2.35012956480441,0,0,11.7056000329203,0,0,5.10164072732231,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.95497793895076,1.78178808499583,1.22864280839693,0.994147647766298,1.40669416410513,0,0,0.211125408127993,1.39473591775749,3.31540698637377,0.755798243562828,6.3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| ||
|short_description=p3@HOXC4 | |||
}} | }} |
Latest revision as of 05:10, 19 September 2015
Short description: | p3@HOXC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HOXC4_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000430889, NM_153633, uc001sex.2_5end |
EntrezGene: | HOXC4 |
HGNC: | 5126 |
UniProt: | P09017Q86TF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.44e-10 | 24 |
pro-B cell | 3.44e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.63e-07 | 14 |